Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.3■□□□□ 0.04
LYSMD2Q8IV50 AC011298.2-201ENST00000617989 482 ntBASIC15.3■□□□□ 0.04
LYSMD2Q8IV50 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD2Q8IV50 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD2Q8IV50 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD2Q8IV50 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD2Q8IV50 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD2Q8IV50 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD2Q8IV50 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.28■□□□□ 0.04
LYSMD2Q8IV50 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD2Q8IV50 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD2Q8IV50 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD2Q8IV50 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD2Q8IV50 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LYSMD2Q8IV50 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD2Q8IV50 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.28■□□□□ 0.04
LYSMD2Q8IV50 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD2Q8IV50 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LYSMD2Q8IV50 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LYSMD2Q8IV50 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD2Q8IV50 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD2Q8IV50 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
LYSMD2Q8IV50 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.28■□□□□ 0.04
LYSMD2Q8IV50 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC15.28■□□□□ 0.04
LYSMD2Q8IV50 MCCD1P1-208ENST00000445732 328 ntBASIC15.28■□□□□ 0.04
LYSMD2Q8IV50 KSR1P1-201ENST00000446298 240 ntBASIC15.28■□□□□ 0.04
LYSMD2Q8IV50 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
LYSMD2Q8IV50 AL353708.3-201ENST00000610272 989 ntBASIC15.28■□□□□ 0.04
LYSMD2Q8IV50 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
LYSMD2Q8IV50 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.28■□□□□ 0.04
LYSMD2Q8IV50 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD2Q8IV50 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.28■□□□□ 0.04
LYSMD2Q8IV50 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD2Q8IV50 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD2Q8IV50 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD2Q8IV50 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
LYSMD2Q8IV50 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD2Q8IV50 AC132938.6-201ENST00000623828 1655 ntBASIC15.28■□□□□ 0.04
LYSMD2Q8IV50 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD2Q8IV50 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD2Q8IV50 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD2Q8IV50 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LYSMD2Q8IV50 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.28■□□□□ 0.04
LYSMD2Q8IV50 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LYSMD2Q8IV50 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
LYSMD2Q8IV50 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LYSMD2Q8IV50 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LYSMD2Q8IV50 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.27■□□□□ 0.04
LYSMD2Q8IV50 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LYSMD2Q8IV50 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LYSMD2Q8IV50 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.27■□□□□ 0.04
LYSMD2Q8IV50 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LYSMD2Q8IV50 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LYSMD2Q8IV50 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LYSMD2Q8IV50 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LYSMD2Q8IV50 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms