Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RFX6Q8HWS3 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFX6Q8HWS3 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFX6Q8HWS3 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFX6Q8HWS3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFX6Q8HWS3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.1■□□□□ 0.49
RFX6Q8HWS3 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFX6Q8HWS3 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFX6Q8HWS3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RFX6Q8HWS3 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFX6Q8HWS3 AC046185.3-201ENST00000623228 1824 ntBASIC18.09■□□□□ 0.49
RFX6Q8HWS3 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFX6Q8HWS3 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFX6Q8HWS3 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
RFX6Q8HWS3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFX6Q8HWS3 AL049757.1-201ENST00000616842 1596 ntBASIC18.09■□□□□ 0.49
RFX6Q8HWS3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFX6Q8HWS3 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFX6Q8HWS3 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFX6Q8HWS3 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFX6Q8HWS3 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.09■□□□□ 0.49
RFX6Q8HWS3 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFX6Q8HWS3 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
RFX6Q8HWS3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.09■□□□□ 0.49
RFX6Q8HWS3 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.09■□□□□ 0.49
RFX6Q8HWS3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.09■□□□□ 0.49
RFX6Q8HWS3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.09■□□□□ 0.49
RFX6Q8HWS3 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.09■□□□□ 0.49
RFX6Q8HWS3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RFX6Q8HWS3 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.09■□□□□ 0.49
RFX6Q8HWS3 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
RFX6Q8HWS3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFX6Q8HWS3 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFX6Q8HWS3 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RFX6Q8HWS3 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RFX6Q8HWS3 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
RFX6Q8HWS3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFX6Q8HWS3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFX6Q8HWS3 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFX6Q8HWS3 AL121761.2-201ENST00000598007 1648 ntBASIC18.09■□□□□ 0.49
RFX6Q8HWS3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFX6Q8HWS3 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RFX6Q8HWS3 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RFX6Q8HWS3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.08■□□□□ 0.49
RFX6Q8HWS3 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
RFX6Q8HWS3 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
RFX6Q8HWS3 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
RFX6Q8HWS3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RFX6Q8HWS3 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RFX6Q8HWS3 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RFX6Q8HWS3 AC233702.3-201ENST00000578656 1387 ntBASIC18.08■□□□□ 0.49
RFX6Q8HWS3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RFX6Q8HWS3 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RFX6Q8HWS3 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.08■□□□□ 0.48
RFX6Q8HWS3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.08■□□□□ 0.48
RFX6Q8HWS3 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.08■□□□□ 0.48
RFX6Q8HWS3 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RFX6Q8HWS3 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RFX6Q8HWS3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RFX6Q8HWS3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RFX6Q8HWS3 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RFX6Q8HWS3 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
RFX6Q8HWS3 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
RFX6Q8HWS3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.08■□□□□ 0.48
RFX6Q8HWS3 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
RFX6Q8HWS3 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RFX6Q8HWS3 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
RFX6Q8HWS3 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RFX6Q8HWS3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
RFX6Q8HWS3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.07■□□□□ 0.48
RFX6Q8HWS3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.07■□□□□ 0.48
RFX6Q8HWS3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RFX6Q8HWS3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFX6Q8HWS3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFX6Q8HWS3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFX6Q8HWS3 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RFX6Q8HWS3 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFX6Q8HWS3 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RFX6Q8HWS3 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.07■□□□□ 0.48
RFX6Q8HWS3 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFX6Q8HWS3 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFX6Q8HWS3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.07■□□□□ 0.48
RFX6Q8HWS3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
RFX6Q8HWS3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFX6Q8HWS3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFX6Q8HWS3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.07■□□□□ 0.48
RFX6Q8HWS3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.07■□□□□ 0.48
RFX6Q8HWS3 MINOS1P3-201ENST00000457048 203 ntBASIC18.07■□□□□ 0.48
RFX6Q8HWS3 TOB2P1-201ENST00000469761 992 ntBASIC18.07■□□□□ 0.48
RFX6Q8HWS3 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.07■□□□□ 0.48
RFX6Q8HWS3 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFX6Q8HWS3 AP002414.4-201ENST00000589764 1148 ntBASIC18.07■□□□□ 0.48
RFX6Q8HWS3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.07■□□□□ 0.48
RFX6Q8HWS3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.07■□□□□ 0.48
RFX6Q8HWS3 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
RFX6Q8HWS3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RFX6Q8HWS3 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFX6Q8HWS3 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFX6Q8HWS3 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFX6Q8HWS3 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms