Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
UBE3BQ7Z3V4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBE3BQ7Z3V4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBE3BQ7Z3V4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
UBE3BQ7Z3V4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBE3BQ7Z3V4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
UBE3BQ7Z3V4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
UBE3BQ7Z3V4 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC21.6■■□□□ 1.05
UBE3BQ7Z3V4 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC21.6■■□□□ 1.05
UBE3BQ7Z3V4 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC21.6■■□□□ 1.05
UBE3BQ7Z3V4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC21.6■■□□□ 1.05
UBE3BQ7Z3V4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC21.6■■□□□ 1.05
UBE3BQ7Z3V4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
UBE3BQ7Z3V4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBE3BQ7Z3V4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
UBE3BQ7Z3V4 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBE3BQ7Z3V4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC21.6■■□□□ 1.05
UBE3BQ7Z3V4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBE3BQ7Z3V4 FST-202ENST00000396947 2538 ntTSL 5 BASIC21.6■■□□□ 1.05
UBE3BQ7Z3V4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBE3BQ7Z3V4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
UBE3BQ7Z3V4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
UBE3BQ7Z3V4 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBE3BQ7Z3V4 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
UBE3BQ7Z3V4 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
UBE3BQ7Z3V4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
UBE3BQ7Z3V4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
UBE3BQ7Z3V4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
UBE3BQ7Z3V4 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC21.59■■□□□ 1.05
UBE3BQ7Z3V4 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
UBE3BQ7Z3V4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
UBE3BQ7Z3V4 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
UBE3BQ7Z3V4 AC112482.1-201ENST00000492080 688 ntBASIC21.59■■□□□ 1.05
UBE3BQ7Z3V4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
UBE3BQ7Z3V4 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC21.59■■□□□ 1.05
UBE3BQ7Z3V4 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC21.59■■□□□ 1.05
UBE3BQ7Z3V4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
UBE3BQ7Z3V4 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
UBE3BQ7Z3V4 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
UBE3BQ7Z3V4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
UBE3BQ7Z3V4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC21.58■■□□□ 1.05
UBE3BQ7Z3V4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC21.58■■□□□ 1.05
UBE3BQ7Z3V4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC21.58■■□□□ 1.05
UBE3BQ7Z3V4 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
UBE3BQ7Z3V4 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC21.58■■□□□ 1.05
UBE3BQ7Z3V4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC21.58■■□□□ 1.05
UBE3BQ7Z3V4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC21.58■■□□□ 1.05
UBE3BQ7Z3V4 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC21.58■■□□□ 1.05
UBE3BQ7Z3V4 COX5A-206ENST00000568783 571 ntTSL 3 BASIC21.58■■□□□ 1.05
UBE3BQ7Z3V4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC21.58■■□□□ 1.05
UBE3BQ7Z3V4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
UBE3BQ7Z3V4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC21.58■■□□□ 1.05
UBE3BQ7Z3V4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
UBE3BQ7Z3V4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC21.58■■□□□ 1.04
UBE3BQ7Z3V4 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
UBE3BQ7Z3V4 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
UBE3BQ7Z3V4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
UBE3BQ7Z3V4 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC21.58■■□□□ 1.04
UBE3BQ7Z3V4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
UBE3BQ7Z3V4 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
UBE3BQ7Z3V4 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
UBE3BQ7Z3V4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
UBE3BQ7Z3V4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
UBE3BQ7Z3V4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
UBE3BQ7Z3V4 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
UBE3BQ7Z3V4 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC21.57■■□□□ 1.04
UBE3BQ7Z3V4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
UBE3BQ7Z3V4 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC21.57■■□□□ 1.04
UBE3BQ7Z3V4 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC21.57■■□□□ 1.04
UBE3BQ7Z3V4 DNAJB3-201ENST00000446806 729 ntBASIC21.57■■□□□ 1.04
UBE3BQ7Z3V4 PAWRP1-201ENST00000451083 565 ntBASIC21.57■■□□□ 1.04
UBE3BQ7Z3V4 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
UBE3BQ7Z3V4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC21.57■■□□□ 1.04
UBE3BQ7Z3V4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
UBE3BQ7Z3V4 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
UBE3BQ7Z3V4 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
UBE3BQ7Z3V4 AC002310.6-201ENST00000624451 1377 ntBASIC21.57■■□□□ 1.04
UBE3BQ7Z3V4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
UBE3BQ7Z3V4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC21.57■■□□□ 1.04
UBE3BQ7Z3V4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
UBE3BQ7Z3V4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
UBE3BQ7Z3V4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
UBE3BQ7Z3V4 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC21.56■■□□□ 1.04
UBE3BQ7Z3V4 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UBE3BQ7Z3V4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC21.56■■□□□ 1.04
UBE3BQ7Z3V4 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
UBE3BQ7Z3V4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UBE3BQ7Z3V4 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
UBE3BQ7Z3V4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UBE3BQ7Z3V4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
UBE3BQ7Z3V4 ATP6V0CP3-201ENST00000417255 467 ntBASIC21.56■■□□□ 1.04
UBE3BQ7Z3V4 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC21.56■■□□□ 1.04
UBE3BQ7Z3V4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC21.56■■□□□ 1.04
UBE3BQ7Z3V4 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC21.56■■□□□ 1.04
UBE3BQ7Z3V4 AL133373.2-201ENST00000623187 2828 ntBASIC21.56■■□□□ 1.04
UBE3BQ7Z3V4 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
UBE3BQ7Z3V4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UBE3BQ7Z3V4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
UBE3BQ7Z3V4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC21.56■■□□□ 1.04
UBE3BQ7Z3V4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms