Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CDC42BPAQ5VT25 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC25.98■■□□□ 1.75
CDC42BPAQ5VT25 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
CDC42BPAQ5VT25 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
CDC42BPAQ5VT25 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CDC42BPAQ5VT25 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC25.97■■□□□ 1.75
CDC42BPAQ5VT25 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC25.97■■□□□ 1.75
CDC42BPAQ5VT25 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CDC42BPAQ5VT25 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC25.97■■□□□ 1.75
CDC42BPAQ5VT25 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC25.97■■□□□ 1.75
CDC42BPAQ5VT25 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC25.97■■□□□ 1.75
CDC42BPAQ5VT25 AP000842.3-202ENST00000569238 1080 ntBASIC25.97■■□□□ 1.75
CDC42BPAQ5VT25 AC012645.4-201ENST00000610691 1061 ntBASIC25.97■■□□□ 1.75
CDC42BPAQ5VT25 AL035252.4-201ENST00000624174 288 ntBASIC25.97■■□□□ 1.75
CDC42BPAQ5VT25 AC008761.3-201ENST00000624803 892 ntBASIC25.97■■□□□ 1.75
CDC42BPAQ5VT25 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC25.97■■□□□ 1.75
CDC42BPAQ5VT25 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC25.97■■□□□ 1.75
CDC42BPAQ5VT25 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC25.97■■□□□ 1.75
CDC42BPAQ5VT25 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC25.97■■□□□ 1.75
CDC42BPAQ5VT25 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC25.97■■□□□ 1.75
CDC42BPAQ5VT25 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CDC42BPAQ5VT25 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CDC42BPAQ5VT25 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC25.97■■□□□ 1.75
CDC42BPAQ5VT25 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC25.97■■□□□ 1.75
CDC42BPAQ5VT25 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CDC42BPAQ5VT25 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC25.96■■□□□ 1.75
CDC42BPAQ5VT25 FOXO1B-201ENST00000504678 1527 ntBASIC25.96■■□□□ 1.75
CDC42BPAQ5VT25 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
CDC42BPAQ5VT25 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC25.96■■□□□ 1.75
CDC42BPAQ5VT25 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CDC42BPAQ5VT25 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
CDC42BPAQ5VT25 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CDC42BPAQ5VT25 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC25.96■■□□□ 1.75
CDC42BPAQ5VT25 ALG1L8P-201ENST00000533887 760 ntBASIC25.96■■□□□ 1.75
CDC42BPAQ5VT25 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC25.96■■□□□ 1.75
CDC42BPAQ5VT25 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CDC42BPAQ5VT25 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC25.96■■□□□ 1.75
CDC42BPAQ5VT25 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC25.96■■□□□ 1.75
CDC42BPAQ5VT25 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CDC42BPAQ5VT25 NME9-203ENST00000383180 2133 ntTSL 2 BASIC25.96■■□□□ 1.75
CDC42BPAQ5VT25 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC25.96■■□□□ 1.75
CDC42BPAQ5VT25 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC25.96■■□□□ 1.75
CDC42BPAQ5VT25 ABALON-201ENST00000629058 1903 ntBASIC25.96■■□□□ 1.75
CDC42BPAQ5VT25 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
CDC42BPAQ5VT25 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
CDC42BPAQ5VT25 UXT-AS1-201ENST00000590504 1525 ntBASIC25.95■■□□□ 1.75
CDC42BPAQ5VT25 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
CDC42BPAQ5VT25 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
CDC42BPAQ5VT25 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CDC42BPAQ5VT25 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC25.95■■□□□ 1.74
CDC42BPAQ5VT25 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
CDC42BPAQ5VT25 MIR943-201ENST00000401286 94 ntBASIC25.95■■□□□ 1.74
CDC42BPAQ5VT25 AC015922.1-201ENST00000421102 1152 ntBASIC25.95■■□□□ 1.74
CDC42BPAQ5VT25 TSPY16P-201ENST00000449843 468 ntBASIC25.95■■□□□ 1.74
CDC42BPAQ5VT25 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC25.95■■□□□ 1.74
CDC42BPAQ5VT25 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC25.95■■□□□ 1.74
CDC42BPAQ5VT25 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC25.95■■□□□ 1.74
CDC42BPAQ5VT25 AF228730.6-201ENST00000641497 218 ntBASIC25.95■■□□□ 1.74
CDC42BPAQ5VT25 AC084121.3-201ENST00000641716 218 ntBASIC25.95■■□□□ 1.74
CDC42BPAQ5VT25 AC105233.6-201ENST00000642093 218 ntBASIC25.95■■□□□ 1.74
CDC42BPAQ5VT25 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CDC42BPAQ5VT25 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC25.95■■□□□ 1.74
CDC42BPAQ5VT25 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC25.95■■□□□ 1.74
CDC42BPAQ5VT25 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC25.95■■□□□ 1.74
CDC42BPAQ5VT25 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
CDC42BPAQ5VT25 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC25.95■■□□□ 1.74
CDC42BPAQ5VT25 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CDC42BPAQ5VT25 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CDC42BPAQ5VT25 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CDC42BPAQ5VT25 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
CDC42BPAQ5VT25 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
CDC42BPAQ5VT25 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC25.94■■□□□ 1.74
CDC42BPAQ5VT25 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CDC42BPAQ5VT25 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC25.94■■□□□ 1.74
CDC42BPAQ5VT25 KRT8P23-201ENST00000560090 1207 ntBASIC25.94■■□□□ 1.74
CDC42BPAQ5VT25 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
CDC42BPAQ5VT25 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CDC42BPAQ5VT25 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
CDC42BPAQ5VT25 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CDC42BPAQ5VT25 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC25.94■■□□□ 1.74
CDC42BPAQ5VT25 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CDC42BPAQ5VT25 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC25.94■■□□□ 1.74
CDC42BPAQ5VT25 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC25.94■■□□□ 1.74
CDC42BPAQ5VT25 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
CDC42BPAQ5VT25 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
CDC42BPAQ5VT25 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
CDC42BPAQ5VT25 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CDC42BPAQ5VT25 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC25.94■■□□□ 1.74
CDC42BPAQ5VT25 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC25.94■■□□□ 1.74
CDC42BPAQ5VT25 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC25.93■■□□□ 1.74
CDC42BPAQ5VT25 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC25.93■■□□□ 1.74
CDC42BPAQ5VT25 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CDC42BPAQ5VT25 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CDC42BPAQ5VT25 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CDC42BPAQ5VT25 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CDC42BPAQ5VT25 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC25.93■■□□□ 1.74
CDC42BPAQ5VT25 CRB3P1-201ENST00000449338 276 ntBASIC25.93■■□□□ 1.74
CDC42BPAQ5VT25 RNA5SP421-201ENST00000516864 134 ntBASIC25.93■■□□□ 1.74
CDC42BPAQ5VT25 AC190387.1-201ENST00000551683 408 ntBASIC25.93■■□□□ 1.74
CDC42BPAQ5VT25 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC25.93■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms