Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERVFC1P60507 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERVFC1P60507 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
ERVFC1P60507 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.17■□□□□ 0.5
ERVFC1P60507 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ERVFC1P60507 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERVFC1P60507 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.16■□□□□ 0.5
ERVFC1P60507 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERVFC1P60507 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.16■□□□□ 0.5
ERVFC1P60507 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
ERVFC1P60507 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ERVFC1P60507 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERVFC1P60507 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ERVFC1P60507 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.16■□□□□ 0.5
ERVFC1P60507 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
ERVFC1P60507 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
ERVFC1P60507 CNN2P2-201ENST00000443536 909 ntBASIC18.16■□□□□ 0.5
ERVFC1P60507 CNN2P3-201ENST00000450201 906 ntBASIC18.16■□□□□ 0.5
ERVFC1P60507 AL512356.2-201ENST00000546955 174 ntBASIC18.16■□□□□ 0.5
ERVFC1P60507 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.16■□□□□ 0.5
ERVFC1P60507 MIR4515-201ENST00000584082 81 ntBASIC18.16■□□□□ 0.5
ERVFC1P60507 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ERVFC1P60507 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.16■□□□□ 0.5
ERVFC1P60507 AL136317.3-201ENST00000618497 906 ntBASIC18.16■□□□□ 0.5
ERVFC1P60507 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.16■□□□□ 0.5
ERVFC1P60507 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.16■□□□□ 0.5
ERVFC1P60507 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.16■□□□□ 0.5
ERVFC1P60507 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ERVFC1P60507 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERVFC1P60507 TUBB3P1-201ENST00000405796 1332 ntBASIC18.16■□□□□ 0.5
ERVFC1P60507 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.16■□□□□ 0.5
ERVFC1P60507 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
ERVFC1P60507 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ERVFC1P60507 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
ERVFC1P60507 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERVFC1P60507 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.15■□□□□ 0.5
ERVFC1P60507 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
ERVFC1P60507 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
ERVFC1P60507 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERVFC1P60507 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.15■□□□□ 0.5
ERVFC1P60507 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
ERVFC1P60507 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.15■□□□□ 0.5
ERVFC1P60507 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ERVFC1P60507 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
ERVFC1P60507 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERVFC1P60507 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.15■□□□□ 0.5
ERVFC1P60507 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERVFC1P60507 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERVFC1P60507 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERVFC1P60507 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.15■□□□□ 0.5
ERVFC1P60507 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERVFC1P60507 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERVFC1P60507 MIR943-201ENST00000401286 94 ntBASIC18.15■□□□□ 0.5
ERVFC1P60507 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERVFC1P60507 RN7SL589P-201ENST00000481268 310 ntBASIC18.15■□□□□ 0.5
ERVFC1P60507 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.15■□□□□ 0.5
ERVFC1P60507 AC190387.1-201ENST00000551683 408 ntBASIC18.15■□□□□ 0.5
ERVFC1P60507 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.15■□□□□ 0.5
ERVFC1P60507 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.15■□□□□ 0.5
ERVFC1P60507 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.15■□□□□ 0.5
ERVFC1P60507 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.15■□□□□ 0.5
ERVFC1P60507 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.15■□□□□ 0.5
ERVFC1P60507 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERVFC1P60507 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERVFC1P60507 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERVFC1P60507 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ERVFC1P60507 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERVFC1P60507 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
ERVFC1P60507 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.15■□□□□ 0.5
ERVFC1P60507 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
ERVFC1P60507 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERVFC1P60507 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.14■□□□□ 0.5
ERVFC1P60507 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ERVFC1P60507 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.14■□□□□ 0.49
ERVFC1P60507 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.14■□□□□ 0.49
ERVFC1P60507 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ERVFC1P60507 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.14■□□□□ 0.49
ERVFC1P60507 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ERVFC1P60507 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ERVFC1P60507 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
ERVFC1P60507 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
ERVFC1P60507 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ERVFC1P60507 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ERVFC1P60507 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.14■□□□□ 0.49
ERVFC1P60507 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.14■□□□□ 0.49
ERVFC1P60507 HMGA1P7-201ENST00000406908 502 ntBASIC18.14■□□□□ 0.49
ERVFC1P60507 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.14■□□□□ 0.49
ERVFC1P60507 AC015922.1-201ENST00000421102 1152 ntBASIC18.14■□□□□ 0.49
ERVFC1P60507 SPCS2P4-201ENST00000436160 681 ntBASIC18.14■□□□□ 0.49
ERVFC1P60507 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ERVFC1P60507 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.14■□□□□ 0.49
ERVFC1P60507 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.14■□□□□ 0.49
ERVFC1P60507 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.14■□□□□ 0.49
ERVFC1P60507 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ERVFC1P60507 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.14■□□□□ 0.49
ERVFC1P60507 RARRES2P8-201ENST00000566335 367 ntBASIC18.14■□□□□ 0.49
ERVFC1P60507 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.14■□□□□ 0.49
ERVFC1P60507 AP001059.3-201ENST00000619053 235 ntBASIC18.14■□□□□ 0.49
ERVFC1P60507 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ERVFC1P60507 AF228730.6-201ENST00000641497 218 ntBASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms