Protein–RNA interactions for Protein: P57768

SNX16, Sorting nexin-16, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX16P57768 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX16P57768 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX16P57768 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX16P57768 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX16P57768 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SNX16P57768 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX16P57768 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SNX16P57768 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX16P57768 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX16P57768 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX16P57768 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.36■□□□□ 0.53
SNX16P57768 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX16P57768 SPDYE21P-201ENST00000413323 827 ntBASIC18.36■□□□□ 0.53
SNX16P57768 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.36■□□□□ 0.53
SNX16P57768 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.36■□□□□ 0.53
SNX16P57768 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNX16P57768 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SNX16P57768 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SNX16P57768 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.36■□□□□ 0.53
SNX16P57768 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.36■□□□□ 0.53
SNX16P57768 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.36■□□□□ 0.53
SNX16P57768 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX16P57768 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX16P57768 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SNX16P57768 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX16P57768 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SNX16P57768 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.36■□□□□ 0.53
SNX16P57768 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNX16P57768 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX16P57768 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX16P57768 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX16P57768 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX16P57768 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
SNX16P57768 AC079776.2-201ENST00000641154 1609 ntBASIC18.35■□□□□ 0.53
SNX16P57768 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX16P57768 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX16P57768 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.35■□□□□ 0.53
SNX16P57768 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX16P57768 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX16P57768 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
SNX16P57768 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.35■□□□□ 0.53
SNX16P57768 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX16P57768 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX16P57768 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX16P57768 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.35■□□□□ 0.53
SNX16P57768 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.35■□□□□ 0.53
SNX16P57768 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.35■□□□□ 0.53
SNX16P57768 AC073592.4-201ENST00000623827 446 ntBASIC18.35■□□□□ 0.53
SNX16P57768 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SNX16P57768 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNX16P57768 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.35■□□□□ 0.53
SNX16P57768 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNX16P57768 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNX16P57768 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX16P57768 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX16P57768 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX16P57768 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNX16P57768 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX16P57768 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX16P57768 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SNX16P57768 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SNX16P57768 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.34■□□□□ 0.53
SNX16P57768 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.34■□□□□ 0.53
SNX16P57768 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SNX16P57768 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SNX16P57768 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SNX16P57768 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX16P57768 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
SNX16P57768 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.34■□□□□ 0.53
SNX16P57768 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.34■□□□□ 0.53
SNX16P57768 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX16P57768 SCARNA2-201ENST00000458748 420 ntBASIC18.34■□□□□ 0.53
SNX16P57768 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.34■□□□□ 0.53
SNX16P57768 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
SNX16P57768 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.34■□□□□ 0.53
SNX16P57768 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.34■□□□□ 0.53
SNX16P57768 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.34■□□□□ 0.53
SNX16P57768 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.34■□□□□ 0.53
SNX16P57768 AL139288.1-201ENST00000623748 933 ntBASIC18.34■□□□□ 0.53
SNX16P57768 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX16P57768 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX16P57768 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.34■□□□□ 0.53
SNX16P57768 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SNX16P57768 CROCCP2-202ENST00000412962 2773 ntBASIC18.34■□□□□ 0.53
SNX16P57768 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SNX16P57768 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX16P57768 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX16P57768 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNX16P57768 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SNX16P57768 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNX16P57768 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.33■□□□□ 0.53
SNX16P57768 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
SNX16P57768 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SNX16P57768 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
SNX16P57768 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.33■□□□□ 0.53
SNX16P57768 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
SNX16P57768 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.33■□□□□ 0.53
SNX16P57768 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNX16P57768 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SNX16P57768 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms