Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
CLDN12P56749 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN12P56749 AL158047.1-201ENST00000445918 881 ntBASIC15.16■□□□□ 0.02
CLDN12P56749 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN12P56749 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
CLDN12P56749 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN12P56749 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.16■□□□□ 0.02
CLDN12P56749 FITM1-202ENST00000559294 800 ntBASIC15.16■□□□□ 0.02
CLDN12P56749 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.16■□□□□ 0.02
CLDN12P56749 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CLDN12P56749 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.16■□□□□ 0.02
CLDN12P56749 ITM2C-210ENST00000620962 501 ntBASIC15.16■□□□□ 0.02
CLDN12P56749 AC010653.2-201ENST00000623505 997 ntBASIC15.16■□□□□ 0.02
CLDN12P56749 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.16■□□□□ 0.02
CLDN12P56749 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN12P56749 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.16■□□□□ 0.02
CLDN12P56749 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN12P56749 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN12P56749 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN12P56749 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.16■□□□□ 0.02
CLDN12P56749 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CLDN12P56749 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.16■□□□□ 0.02
CLDN12P56749 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN12P56749 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN12P56749 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN12P56749 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN12P56749 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.16■□□□□ 0.02
CLDN12P56749 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN12P56749 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.16■□□□□ 0.02
CLDN12P56749 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN12P56749 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
CLDN12P56749 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN12P56749 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN12P56749 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CLDN12P56749 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN12P56749 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.15■□□□□ 0.02
CLDN12P56749 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN12P56749 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.15■□□□□ 0.02
CLDN12P56749 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN12P56749 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN12P56749 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.15■□□□□ 0.02
CLDN12P56749 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN12P56749 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CLDN12P56749 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN12P56749 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.15■□□□□ 0.02
CLDN12P56749 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.15■□□□□ 0.02
CLDN12P56749 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN12P56749 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CLDN12P56749 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN12P56749 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN12P56749 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN12P56749 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.15■□□□□ 0.02
CLDN12P56749 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.15■□□□□ 0.02
CLDN12P56749 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CLDN12P56749 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN12P56749 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN12P56749 PRORSD1P-201ENST00000295112 541 ntBASIC15.15■□□□□ 0.02
CLDN12P56749 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN12P56749 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.15■□□□□ 0.02
CLDN12P56749 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.15■□□□□ 0.02
CLDN12P56749 MIR1238-201ENST00000408483 83 ntBASIC15.15■□□□□ 0.02
CLDN12P56749 AC005104.2-201ENST00000427818 678 ntBASIC15.15■□□□□ 0.02
CLDN12P56749 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.15■□□□□ 0.02
CLDN12P56749 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC15.15■□□□□ 0.02
CLDN12P56749 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.15■□□□□ 0.02
CLDN12P56749 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC15.15■□□□□ 0.02
CLDN12P56749 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.15■□□□□ 0.02
CLDN12P56749 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC15.15■□□□□ 0.02
CLDN12P56749 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN12P56749 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.15■□□□□ 0.02
CLDN12P56749 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN12P56749 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CLDN12P56749 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CLDN12P56749 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.15■□□□□ 0.02
CLDN12P56749 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN12P56749 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CLDN12P56749 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
CLDN12P56749 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN12P56749 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN12P56749 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN12P56749 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN12P56749 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.15■□□□□ 0.02
CLDN12P56749 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CLDN12P56749 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CLDN12P56749 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN12P56749 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN12P56749 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.14■□□□□ 0.02
CLDN12P56749 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.14■□□□□ 0.01
CLDN12P56749 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN12P56749 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.14■□□□□ 0.01
CLDN12P56749 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CLDN12P56749 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.14■□□□□ 0.01
CLDN12P56749 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN12P56749 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.14■□□□□ 0.01
CLDN12P56749 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.14■□□□□ 0.01
CLDN12P56749 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN12P56749 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN12P56749 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN12P56749 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN12P56749 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms