Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 IL9RP2-201ENST00000423948 1312 ntBASIC15.23■□□□□ 0.03
FOXG1P55316 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.23■□□□□ 0.03
FOXG1P55316 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXG1P55316 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.23■□□□□ 0.03
FOXG1P55316 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.23■□□□□ 0.03
FOXG1P55316 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
FOXG1P55316 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.23■□□□□ 0.03
FOXG1P55316 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
FOXG1P55316 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.23■□□□□ 0.03
FOXG1P55316 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXG1P55316 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXG1P55316 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXG1P55316 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.23■□□□□ 0.03
FOXG1P55316 KRT18P27-201ENST00000427733 1299 ntBASIC15.23■□□□□ 0.03
FOXG1P55316 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.23■□□□□ 0.03
FOXG1P55316 AC098831.1-202ENST00000438821 336 ntBASIC15.23■□□□□ 0.03
FOXG1P55316 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.23■□□□□ 0.03
FOXG1P55316 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.23■□□□□ 0.03
FOXG1P55316 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.23■□□□□ 0.03
FOXG1P55316 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.23■□□□□ 0.03
FOXG1P55316 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.23■□□□□ 0.03
FOXG1P55316 AC105339.3-201ENST00000560043 636 ntBASIC15.23■□□□□ 0.03
FOXG1P55316 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.23■□□□□ 0.03
FOXG1P55316 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.23■□□□□ 0.03
FOXG1P55316 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.23■□□□□ 0.03
FOXG1P55316 AC120114.3-201ENST00000611923 658 ntBASIC15.23■□□□□ 0.03
FOXG1P55316 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.23■□□□□ 0.03
FOXG1P55316 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.23■□□□□ 0.03
FOXG1P55316 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
FOXG1P55316 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXG1P55316 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXG1P55316 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
FOXG1P55316 NCF1C-201ENST00000438382 1427 ntBASIC15.23■□□□□ 0.03
FOXG1P55316 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.23■□□□□ 0.03
FOXG1P55316 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.23■□□□□ 0.03
FOXG1P55316 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXG1P55316 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXG1P55316 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXG1P55316 AC138932.1-201ENST00000534164 6830 ntBASIC15.23■□□□□ 0.03
FOXG1P55316 AL138688.1-201ENST00000624851 1594 ntBASIC15.23■□□□□ 0.03
FOXG1P55316 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXG1P55316 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
FOXG1P55316 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXG1P55316 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
FOXG1P55316 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXG1P55316 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
FOXG1P55316 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXG1P55316 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXG1P55316 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXG1P55316 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
FOXG1P55316 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.22■□□□□ 0.03
FOXG1P55316 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
FOXG1P55316 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXG1P55316 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.22■□□□□ 0.03
FOXG1P55316 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
FOXG1P55316 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.22■□□□□ 0.03
FOXG1P55316 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXG1P55316 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.22■□□□□ 0.03
FOXG1P55316 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.22■□□□□ 0.03
FOXG1P55316 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
FOXG1P55316 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.22■□□□□ 0.03
FOXG1P55316 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.22■□□□□ 0.03
FOXG1P55316 AL353135.1-201ENST00000606729 504 ntBASIC15.22■□□□□ 0.03
FOXG1P55316 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
FOXG1P55316 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.22■□□□□ 0.03
FOXG1P55316 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXG1P55316 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXG1P55316 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.22■□□□□ 0.03
FOXG1P55316 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXG1P55316 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXG1P55316 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
FOXG1P55316 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXG1P55316 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.22■□□□□ 0.03
FOXG1P55316 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.22■□□□□ 0.03
FOXG1P55316 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXG1P55316 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
FOXG1P55316 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
FOXG1P55316 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
FOXG1P55316 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FOXG1P55316 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
FOXG1P55316 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
FOXG1P55316 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
FOXG1P55316 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
FOXG1P55316 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
FOXG1P55316 RPS2P28-201ENST00000314255 741 ntBASIC15.21■□□□□ 0.03
FOXG1P55316 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.21■□□□□ 0.03
FOXG1P55316 SLC25A1P3-201ENST00000395415 828 ntBASIC15.21■□□□□ 0.03
FOXG1P55316 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.21■□□□□ 0.03
FOXG1P55316 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.21■□□□□ 0.03
FOXG1P55316 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.21■□□□□ 0.03
FOXG1P55316 AL139424.1-201ENST00000607572 797 ntBASIC15.21■□□□□ 0.03
FOXG1P55316 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.21■□□□□ 0.03
FOXG1P55316 AC117500.6-201ENST00000624871 588 ntBASIC15.21■□□□□ 0.03
FOXG1P55316 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
FOXG1P55316 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FOXG1P55316 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
FOXG1P55316 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FOXG1P55316 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
FOXG1P55316 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
FOXG1P55316 BCL2-203ENST00000589955 5011 ntBASIC15.21■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms