Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH4P55283 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CDH4P55283 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CDH4P55283 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH4P55283 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH4P55283 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH4P55283 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.74■□□□□ 0.43
CDH4P55283 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH4P55283 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH4P55283 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.74■□□□□ 0.43
CDH4P55283 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH4P55283 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.74■□□□□ 0.43
CDH4P55283 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.74■□□□□ 0.43
CDH4P55283 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH4P55283 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.74■□□□□ 0.43
CDH4P55283 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH4P55283 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CDH4P55283 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH4P55283 AC117500.6-201ENST00000624871 588 ntBASIC17.74■□□□□ 0.43
CDH4P55283 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH4P55283 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.74■□□□□ 0.43
CDH4P55283 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH4P55283 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH4P55283 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH4P55283 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH4P55283 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH4P55283 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.74■□□□□ 0.43
CDH4P55283 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH4P55283 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH4P55283 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
CDH4P55283 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH4P55283 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH4P55283 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH4P55283 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH4P55283 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CDH4P55283 AL590787.1-201ENST00000568856 1315 ntBASIC17.73■□□□□ 0.43
CDH4P55283 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDH4P55283 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDH4P55283 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.73■□□□□ 0.43
CDH4P55283 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH4P55283 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH4P55283 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH4P55283 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDH4P55283 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.73■□□□□ 0.43
CDH4P55283 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDH4P55283 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDH4P55283 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.73■□□□□ 0.43
CDH4P55283 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.73■□□□□ 0.43
CDH4P55283 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH4P55283 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.73■□□□□ 0.43
CDH4P55283 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CDH4P55283 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH4P55283 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CDH4P55283 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH4P55283 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CDH4P55283 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH4P55283 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH4P55283 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH4P55283 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CDH4P55283 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH4P55283 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH4P55283 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH4P55283 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.73■□□□□ 0.43
CDH4P55283 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH4P55283 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH4P55283 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.72■□□□□ 0.43
CDH4P55283 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CDH4P55283 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CDH4P55283 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH4P55283 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CDH4P55283 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH4P55283 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
CDH4P55283 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH4P55283 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH4P55283 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH4P55283 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH4P55283 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH4P55283 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CDH4P55283 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.72■□□□□ 0.43
CDH4P55283 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.72■□□□□ 0.43
CDH4P55283 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.72■□□□□ 0.43
CDH4P55283 AL805961.1-202ENST00000641562 540 ntBASIC17.72■□□□□ 0.43
CDH4P55283 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.72■□□□□ 0.43
CDH4P55283 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH4P55283 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH4P55283 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDH4P55283 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH4P55283 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CDH4P55283 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH4P55283 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH4P55283 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CDH4P55283 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH4P55283 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH4P55283 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH4P55283 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH4P55283 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH4P55283 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.71■□□□□ 0.43
CDH4P55283 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.71■□□□□ 0.43
CDH4P55283 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.71■□□□□ 0.43
CDH4P55283 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms