Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.21■□□□□ 0.19
PSMD4P55036 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.21■□□□□ 0.19
PSMD4P55036 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
PSMD4P55036 AL121772.3-201ENST00000610840 674 ntBASIC16.21■□□□□ 0.19
PSMD4P55036 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.21■□□□□ 0.19
PSMD4P55036 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PSMD4P55036 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.21■□□□□ 0.19
PSMD4P55036 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PSMD4P55036 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.21■□□□□ 0.19
PSMD4P55036 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PSMD4P55036 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PSMD4P55036 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PSMD4P55036 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PSMD4P55036 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PSMD4P55036 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PSMD4P55036 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.21■□□□□ 0.18
PSMD4P55036 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PSMD4P55036 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
PSMD4P55036 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
PSMD4P55036 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
PSMD4P55036 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.2■□□□□ 0.18
PSMD4P55036 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
PSMD4P55036 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PSMD4P55036 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.2■□□□□ 0.18
PSMD4P55036 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PSMD4P55036 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PSMD4P55036 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.2■□□□□ 0.18
PSMD4P55036 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.2■□□□□ 0.18
PSMD4P55036 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.2■□□□□ 0.18
PSMD4P55036 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
PSMD4P55036 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PSMD4P55036 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PSMD4P55036 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.2■□□□□ 0.18
PSMD4P55036 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PSMD4P55036 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PSMD4P55036 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PSMD4P55036 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.2■□□□□ 0.18
PSMD4P55036 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PSMD4P55036 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.2■□□□□ 0.18
PSMD4P55036 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.2■□□□□ 0.18
PSMD4P55036 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
PSMD4P55036 RCN1P2-201ENST00000398357 915 ntBASIC16.2■□□□□ 0.18
PSMD4P55036 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.2■□□□□ 0.18
PSMD4P55036 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PSMD4P55036 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
PSMD4P55036 NUS1P2-201ENST00000417358 873 ntBASIC16.2■□□□□ 0.18
PSMD4P55036 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.2■□□□□ 0.18
PSMD4P55036 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.2■□□□□ 0.18
PSMD4P55036 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.2■□□□□ 0.18
PSMD4P55036 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.2■□□□□ 0.18
PSMD4P55036 PRELID1P1-202ENST00000567272 903 ntBASIC16.2■□□□□ 0.18
PSMD4P55036 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PSMD4P55036 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.2■□□□□ 0.18
PSMD4P55036 LINC01711-201ENST00000598340 967 ntBASIC16.2■□□□□ 0.18
PSMD4P55036 AC138894.3-201ENST00000603787 634 ntBASIC16.2■□□□□ 0.18
PSMD4P55036 AL591684.3-201ENST00000605187 298 ntBASIC16.2■□□□□ 0.18
PSMD4P55036 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PSMD4P55036 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.2■□□□□ 0.18
PSMD4P55036 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.2■□□□□ 0.18
PSMD4P55036 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PSMD4P55036 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.2■□□□□ 0.18
PSMD4P55036 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
PSMD4P55036 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PSMD4P55036 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PSMD4P55036 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.19■□□□□ 0.18
PSMD4P55036 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.19■□□□□ 0.18
PSMD4P55036 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.19■□□□□ 0.18
PSMD4P55036 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PSMD4P55036 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PSMD4P55036 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
PSMD4P55036 AL049757.1-201ENST00000616842 1596 ntBASIC16.19■□□□□ 0.18
PSMD4P55036 AL353593.2-201ENST00000602529 1483 ntBASIC16.19■□□□□ 0.18
PSMD4P55036 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PSMD4P55036 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PSMD4P55036 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.19■□□□□ 0.18
PSMD4P55036 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.19■□□□□ 0.18
PSMD4P55036 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.19■□□□□ 0.18
PSMD4P55036 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.19■□□□□ 0.18
PSMD4P55036 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
PSMD4P55036 AC019129.2-201ENST00000609837 1235 ntBASIC16.19■□□□□ 0.18
PSMD4P55036 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PSMD4P55036 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PSMD4P55036 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PSMD4P55036 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
PSMD4P55036 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.19■□□□□ 0.18
PSMD4P55036 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.19■□□□□ 0.18
PSMD4P55036 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
PSMD4P55036 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PSMD4P55036 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.19■□□□□ 0.18
PSMD4P55036 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PSMD4P55036 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
PSMD4P55036 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PSMD4P55036 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PSMD4P55036 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PSMD4P55036 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.18■□□□□ 0.18
PSMD4P55036 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PSMD4P55036 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PSMD4P55036 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
PSMD4P55036 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.18■□□□□ 0.18
PSMD4P55036 LYSMD4-203ENST00000378904 2122 ntBASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms