Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC21.21■□□□□ 0.99
PDE1AP54750 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PDE1AP54750 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PDE1AP54750 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDE1AP54750 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PDE1AP54750 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC21.21■□□□□ 0.99
PDE1AP54750 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDE1AP54750 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC21.2■□□□□ 0.99
PDE1AP54750 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
PDE1AP54750 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDE1AP54750 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
PDE1AP54750 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC21.2■□□□□ 0.98
PDE1AP54750 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PDE1AP54750 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC21.2■□□□□ 0.98
PDE1AP54750 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
PDE1AP54750 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDE1AP54750 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PDE1AP54750 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
PDE1AP54750 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.2■□□□□ 0.98
PDE1AP54750 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC21.2■□□□□ 0.98
PDE1AP54750 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC21.2■□□□□ 0.98
PDE1AP54750 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PDE1AP54750 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC21.2■□□□□ 0.98
PDE1AP54750 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC21.2■□□□□ 0.98
PDE1AP54750 AL121772.3-201ENST00000610840 674 ntBASIC21.2■□□□□ 0.98
PDE1AP54750 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC21.2■□□□□ 0.98
PDE1AP54750 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
PDE1AP54750 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDE1AP54750 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDE1AP54750 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
PDE1AP54750 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDE1AP54750 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
PDE1AP54750 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDE1AP54750 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDE1AP54750 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDE1AP54750 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDE1AP54750 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PDE1AP54750 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PDE1AP54750 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDE1AP54750 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDE1AP54750 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC21.19■□□□□ 0.98
PDE1AP54750 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDE1AP54750 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDE1AP54750 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDE1AP54750 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
PDE1AP54750 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDE1AP54750 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDE1AP54750 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDE1AP54750 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDE1AP54750 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDE1AP54750 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
PDE1AP54750 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDE1AP54750 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC21.19■□□□□ 0.98
PDE1AP54750 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDE1AP54750 CLEC4GP1-201ENST00000596555 870 ntBASIC21.19■□□□□ 0.98
PDE1AP54750 COPE-211ENST00000600932 1144 ntTSL 5 BASIC21.19■□□□□ 0.98
PDE1AP54750 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
PDE1AP54750 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDE1AP54750 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDE1AP54750 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDE1AP54750 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
PDE1AP54750 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDE1AP54750 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
PDE1AP54750 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
PDE1AP54750 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC21.19■□□□□ 0.98
PDE1AP54750 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC21.19■□□□□ 0.98
PDE1AP54750 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PDE1AP54750 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDE1AP54750 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC21.18■□□□□ 0.98
PDE1AP54750 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDE1AP54750 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDE1AP54750 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC21.18■□□□□ 0.98
PDE1AP54750 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDE1AP54750 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PDE1AP54750 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDE1AP54750 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDE1AP54750 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PDE1AP54750 PRELID1P1-202ENST00000567272 903 ntBASIC21.18■□□□□ 0.98
PDE1AP54750 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC21.18■□□□□ 0.98
PDE1AP54750 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PDE1AP54750 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC21.18■□□□□ 0.98
PDE1AP54750 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC21.18■□□□□ 0.98
PDE1AP54750 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDE1AP54750 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PDE1AP54750 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PDE1AP54750 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PDE1AP54750 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PDE1AP54750 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDE1AP54750 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDE1AP54750 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDE1AP54750 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDE1AP54750 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PDE1AP54750 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PDE1AP54750 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PDE1AP54750 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PDE1AP54750 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDE1AP54750 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC21.17■□□□□ 0.98
PDE1AP54750 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC21.17■□□□□ 0.98
PDE1AP54750 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC21.17■□□□□ 0.98
PDE1AP54750 ACTG1P4-201ENST00000425123 1122 ntBASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms