Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.14■□□□□ 0.01
ATP1B3P54709 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATP1B3P54709 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.14■□□□□ 0.01
ATP1B3P54709 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATP1B3P54709 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
ATP1B3P54709 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.14■□□□□ 0.01
ATP1B3P54709 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.13■□□□□ 0.01
ATP1B3P54709 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ATP1B3P54709 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP1B3P54709 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.13■□□□□ 0.01
ATP1B3P54709 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP1B3P54709 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP1B3P54709 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.13■□□□□ 0.01
ATP1B3P54709 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP1B3P54709 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP1B3P54709 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
ATP1B3P54709 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP1B3P54709 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ATP1B3P54709 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP1B3P54709 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.13■□□□□ 0.01
ATP1B3P54709 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.13■□□□□ 0.01
ATP1B3P54709 KRT18P57-201ENST00000443599 1254 ntBASIC15.13■□□□□ 0.01
ATP1B3P54709 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.13■□□□□ 0.01
ATP1B3P54709 AC068472.1-201ENST00000474589 881 ntBASIC15.13■□□□□ 0.01
ATP1B3P54709 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC15.13■□□□□ 0.01
ATP1B3P54709 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP1B3P54709 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.13■□□□□ 0.01
ATP1B3P54709 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ATP1B3P54709 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ATP1B3P54709 AC005332.3-201ENST00000589904 676 ntBASIC15.13■□□□□ 0.01
ATP1B3P54709 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.13■□□□□ 0.01
ATP1B3P54709 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP1B3P54709 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.13■□□□□ 0.01
ATP1B3P54709 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
ATP1B3P54709 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
ATP1B3P54709 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
ATP1B3P54709 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP1B3P54709 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP1B3P54709 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
ATP1B3P54709 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP1B3P54709 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
ATP1B3P54709 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP1B3P54709 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.12■□□□□ 0.01
ATP1B3P54709 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATP1B3P54709 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP1B3P54709 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP1B3P54709 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
ATP1B3P54709 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.12■□□□□ 0.01
ATP1B3P54709 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP1B3P54709 AL391005.1-201ENST00000623953 2435 ntBASIC15.12■□□□□ 0.01
ATP1B3P54709 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATP1B3P54709 AC016396.2-201ENST00000562575 1417 ntBASIC15.12■□□□□ 0.01
ATP1B3P54709 LINC01311-201ENST00000565162 1445 ntBASIC15.12■□□□□ 0.01
ATP1B3P54709 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.12■□□□□ 0.01
ATP1B3P54709 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.12■□□□□ 0.01
ATP1B3P54709 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP1B3P54709 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.12■□□□□ 0.01
ATP1B3P54709 KRT18P38-201ENST00000449496 1282 ntBASIC15.12■□□□□ 0.01
ATP1B3P54709 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP1B3P54709 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.12■□□□□ 0.01
ATP1B3P54709 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
ATP1B3P54709 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP1B3P54709 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.12■□□□□ 0.01
ATP1B3P54709 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATP1B3P54709 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATP1B3P54709 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.12■□□□□ 0.01
ATP1B3P54709 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.12■□□□□ 0.01
ATP1B3P54709 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.12■□□□□ 0.01
ATP1B3P54709 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.12■□□□□ 0.01
ATP1B3P54709 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
ATP1B3P54709 LINC01023-201ENST00000606054 436 ntBASIC15.12■□□□□ 0.01
ATP1B3P54709 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC15.12■□□□□ 0.01
ATP1B3P54709 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.12■□□□□ 0.01
ATP1B3P54709 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
ATP1B3P54709 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.12■□□□□ 0.01
ATP1B3P54709 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP1B3P54709 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
ATP1B3P54709 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
ATP1B3P54709 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP1B3P54709 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP1B3P54709 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.12■□□□□ 0.01
ATP1B3P54709 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP1B3P54709 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.12■□□□□ 0.01
ATP1B3P54709 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP1B3P54709 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
ATP1B3P54709 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP1B3P54709 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
ATP1B3P54709 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATP1B3P54709 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP1B3P54709 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.12■□□□□ 0.01
ATP1B3P54709 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP1B3P54709 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.11■□□□□ 0.01
ATP1B3P54709 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.11■□□□□ 0.01
ATP1B3P54709 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.11■□□□□ 0.01
ATP1B3P54709 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
ATP1B3P54709 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
ATP1B3P54709 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP1B3P54709 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP1B3P54709 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP1B3P54709 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms