Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATXN3P54252 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATXN3P54252 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATXN3P54252 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.8■□□□□ 0.44
ATXN3P54252 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATXN3P54252 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATXN3P54252 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
ATXN3P54252 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATXN3P54252 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATXN3P54252 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.8■□□□□ 0.44
ATXN3P54252 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.8■□□□□ 0.44
ATXN3P54252 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
ATXN3P54252 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATXN3P54252 AP005117.1-201ENST00000584346 1413 ntBASIC17.8■□□□□ 0.44
ATXN3P54252 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.8■□□□□ 0.44
ATXN3P54252 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATXN3P54252 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATXN3P54252 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATXN3P54252 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
ATXN3P54252 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.79■□□□□ 0.44
ATXN3P54252 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATXN3P54252 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATXN3P54252 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATXN3P54252 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATXN3P54252 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
ATXN3P54252 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATXN3P54252 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.79■□□□□ 0.44
ATXN3P54252 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATXN3P54252 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATXN3P54252 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATXN3P54252 INTS4P1-201ENST00000438455 1935 ntBASIC17.79■□□□□ 0.44
ATXN3P54252 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATXN3P54252 AL356309.3-201ENST00000624132 1934 ntBASIC17.79■□□□□ 0.44
ATXN3P54252 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATXN3P54252 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATXN3P54252 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATXN3P54252 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATXN3P54252 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATXN3P54252 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.79■□□□□ 0.44
ATXN3P54252 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.79■□□□□ 0.44
ATXN3P54252 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.79■□□□□ 0.44
ATXN3P54252 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.79■□□□□ 0.44
ATXN3P54252 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.79■□□□□ 0.44
ATXN3P54252 AC040169.1-201ENST00000565382 521 ntBASIC17.79■□□□□ 0.44
ATXN3P54252 AL355385.1-201ENST00000606123 409 ntBASIC17.79■□□□□ 0.44
ATXN3P54252 Z83851.2-201ENST00000609564 659 ntBASIC17.79■□□□□ 0.44
ATXN3P54252 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATXN3P54252 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.79■□□□□ 0.44
ATXN3P54252 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATXN3P54252 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.79■□□□□ 0.44
ATXN3P54252 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.79■□□□□ 0.44
ATXN3P54252 AC009102.3-201ENST00000623118 1491 ntBASIC17.79■□□□□ 0.44
ATXN3P54252 HEIH-201ENST00000623091 1652 ntBASIC17.79■□□□□ 0.44
ATXN3P54252 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
ATXN3P54252 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATXN3P54252 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATXN3P54252 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATXN3P54252 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATXN3P54252 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.79■□□□□ 0.44
ATXN3P54252 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATXN3P54252 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATXN3P54252 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATXN3P54252 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATXN3P54252 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATXN3P54252 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
ATXN3P54252 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATXN3P54252 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATXN3P54252 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.79■□□□□ 0.44
ATXN3P54252 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATXN3P54252 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
ATXN3P54252 REXO1L9P-201ENST00000604264 2108 ntBASIC17.78■□□□□ 0.44
ATXN3P54252 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.78■□□□□ 0.44
ATXN3P54252 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
ATXN3P54252 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATXN3P54252 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATXN3P54252 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATXN3P54252 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ATXN3P54252 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.78■□□□□ 0.44
ATXN3P54252 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATXN3P54252 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATXN3P54252 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATXN3P54252 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATXN3P54252 GPX1P2-201ENST00000429271 606 ntBASIC17.78■□□□□ 0.44
ATXN3P54252 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.78■□□□□ 0.44
ATXN3P54252 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.78■□□□□ 0.44
ATXN3P54252 RNA5SP416-201ENST00000516838 111 ntBASIC17.78■□□□□ 0.44
ATXN3P54252 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.78■□□□□ 0.44
ATXN3P54252 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATXN3P54252 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATXN3P54252 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATXN3P54252 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
ATXN3P54252 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ATXN3P54252 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ATXN3P54252 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATXN3P54252 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.77■□□□□ 0.44
ATXN3P54252 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.77■□□□□ 0.44
ATXN3P54252 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.77■□□□□ 0.44
ATXN3P54252 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATXN3P54252 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATXN3P54252 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms