Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.153e-6■□□□□ 10
NCBP2P52298 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.121e-6■□□□□ 10
NCBP2P52298 RSRP1-219ENST00000568701 629 ntAPPRIS ALT2 TSL 415.45■□□□□ 0.061e-6■□□□□ 10
NCBP2P52298 RSRP1-208ENST00000561867 477 ntAPPRIS ALT2 TSL 315.45■□□□□ 0.061e-6■□□□□ 10
NCBP2P52298 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.043e-6■□□□□ 10
NCBP2P52298 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -01e-6■□□□□ 10
NCBP2P52298 RSRP1-217ENST00000568254 2013 ntTSL 1 (best)14.7□□□□□ -0.061e-6■□□□□ 10
NCBP2P52298 RSRP1-220ENST00000568996 480 ntAPPRIS ALT2 TSL 314.39□□□□□ -0.111e-6■□□□□ 10
NCBP2P52298 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.252e-16■□□□□ 10
NCBP2P52298 RBMX-210ENST00000565907 563 ntTSL 213.25□□□□□ -0.293e-6■□□□□ 10
NCBP2P52298 RSRP1-204ENST00000473314 3034 ntTSL 213.16□□□□□ -0.31e-6■□□□□ 10
NCBP2P52298 RBMX-204ENST00000464781 1852 ntTSL 213.13□□□□□ -0.313e-6■□□□□ 10
NCBP2P52298 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.413e-6■□□□□ 10
NCBP2P52298 RSRP1-216ENST00000568212 570 ntTSL 412.16□□□□□ -0.461e-6■□□□□ 10
NCBP2P52298 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC12.05□□□□□ -0.483e-6■□□□□ 10
NCBP2P52298 RSRP1-207ENST00000498238 2941 ntTSL 211.83□□□□□ -0.511e-6■□□□□ 10
NCBP2P52298 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC11.78□□□□□ -0.523e-6■□□□□ 10
NCBP2P52298 RBMX-201ENST00000320676 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.543e-6■□□□□ 10
NCBP2P52298 RBMX-208ENST00000563370 577 ntTSL 311.25□□□□□ -0.613e-6■□□□□ 10
NCBP2P52298 RBMX-211ENST00000567262 477 ntTSL 511.25□□□□□ -0.613e-6■□□□□ 10
NCBP2P52298 RBMX-212ENST00000568578 4887 ntTSL 1 (best)9.25□□□□□ -0.933e-6■□□□□ 10
NCBP2P52298 RBMX-207ENST00000562646 2148 ntTSL 1 (best) BASIC8.71□□□□□ -1.023e-6■□□□□ 10
NCBP2P52298 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.151e-11■□□□□ 10
NCBP2P52298 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.04□□□□□ -1.63e-6■□□□□ 10
NCBP2P52298 NOP58-203ENST00000433543 714 ntTSL 32.53□□□□□ -23e-6■□□□□ 10
NCBP2P52298 SNORD11-201ENST00000459124 84 ntBASIC0.51□□□□□ -2.333e-6■□□□□ 10
NCBP2P52298 PSMG4-201ENST00000324987 778 ntTSL 324.81■■□□□ 1.565e-11■□□□□ 10
NCBP2P52298 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC24.81■■□□□ 1.565e-11■□□□□ 10
NCBP2P52298 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC24.47■■□□□ 1.515e-11■□□□□ 10
NCBP2P52298 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.195e-11■□□□□ 10
NCBP2P52298 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC22.17■■□□□ 1.145e-11■□□□□ 10
NCBP2P52298 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.023e-6■□□□□ 10
NCBP2P52298 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.08■□□□□ 0.653e-6■□□□□ 10
NCBP2P52298 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.81■□□□□ 0.445e-11■□□□□ 10
NCBP2P52298 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.063e-6■□□□□ 10
NCBP2P52298 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.49□□□□□ -0.095e-9■□□□□ 10
NCBP2P52298 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.44□□□□□ -0.15e-9■□□□□ 10
NCBP2P52298 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.155e-9■□□□□ 10
NCBP2P52298 PSMG4-208ENST00000454610 2323 ntTSL 213.83□□□□□ -0.25e-11■□□□□ 10
NCBP2P52298 RTEL1-202ENST00000356810 1339 ntTSL 1 (best)13.77□□□□□ -0.215e-9■□□□□ 10
NCBP2P52298 PSMG4-210ENST00000509933 2241 ntTSL 213.55□□□□□ -0.245e-11■□□□□ 10
NCBP2P52298 RTEL1-211ENST00000508582 4273 ntTSL 2 BASIC12.38□□□□□ -0.435e-9■□□□□ 10
NCBP2P52298 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC12.36□□□□□ -0.435e-11■□□□□ 10
NCBP2P52298 COL27A1-202ENST00000451716 2865 ntTSL 1 (best)11.41□□□□□ -0.585e-9■□□□□ 10
NCBP2P52298 LGR5-206ENST00000550851 4095 ntTSL 211.33□□□□□ -0.65e-9■□□□□ 10
NCBP2P52298 RTEL1-208ENST00000469728 601 ntTSL 39.86□□□□□ -0.835e-9■□□□□ 10
NCBP2P52298 CCDC117-206ENST00000453543 1026 ntTSL 227.53■■■□□ 29e-7■□□□□ 10
NCBP2P52298 FOXP1-217ENST00000498154 535 ntTSL 322.25■■□□□ 1.159e-7■□□□□ 10
NCBP2P52298 CCDC117-204ENST00000444523 463 ntTSL 421.93■■□□□ 1.19e-7■□□□□ 10
NCBP2P52298 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.049e-7■□□□□ 10
NCBP2P52298 S100PBP-207ENST00000482212 706 ntTSL 221.37■■□□□ 1.019e-7■□□□□ 10
NCBP2P52298 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.869e-7■□□□□ 10
NCBP2P52298 TMEM199-206ENST00000579762 385 ntTSL 520.14■□□□□ 0.819e-7■□□□□ 10
NCBP2P52298 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.84■□□□□ 0.779e-7■□□□□ 10
NCBP2P52298 SMG7-205ENST00000440812 1190 ntTSL 518.89■□□□□ 0.619e-7■□□□□ 10
NCBP2P52298 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.86■□□□□ 0.619e-7■□□□□ 10
NCBP2P52298 CCT7-204ENST00000409924 567 ntTSL 318.58■□□□□ 0.569e-16■□□□□ 10
NCBP2P52298 CCT7-211ENST00000480489 527 ntTSL 218.58■□□□□ 0.569e-16■□□□□ 10
NCBP2P52298 TMEM199-208ENST00000581386 481 ntTSL 418.48■□□□□ 0.559e-7■□□□□ 10
NCBP2P52298 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.539e-7■□□□□ 10
NCBP2P52298 TMEM199-205ENST00000555264 674 ntTSL 518.16■□□□□ 0.59e-7■□□□□ 10
NCBP2P52298 HJURP-203ENST00000414924 1776 ntAPPRIS ALT2 TSL 418.08■□□□□ 0.487e-11■□□□□ 10
NCBP2P52298 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18■□□□□ 0.479e-16■□□□□ 10
NCBP2P52298 CCT7-203ENST00000399032 593 ntTSL 418■□□□□ 0.479e-16■□□□□ 10
NCBP2P52298 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.2■□□□□ 0.349e-7■□□□□ 10
NCBP2P52298 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.349e-7■□□□□ 10
NCBP2P52298 S100PBP-215ENST00000531123 1688 ntTSL 516.94■□□□□ 0.39e-7■□□□□ 10
NCBP2P52298 TMEM199-207ENST00000580868 578 ntTSL 516.85■□□□□ 0.299e-7■□□□□ 10
NCBP2P52298 BCS1L-209ENST00000430322 1036 ntTSL 516.8■□□□□ 0.289e-7■□□□□ 10
NCBP2P52298 BCS1L-214ENST00000456050 815 ntTSL 516.8■□□□□ 0.289e-7■□□□□ 10
NCBP2P52298 SMG7-203ENST00000367538 328 ntTSL 216.61■□□□□ 0.259e-7■□□□□ 10
NCBP2P52298 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.55■□□□□ 0.249e-16■□□□□ 10
NCBP2P52298 SMG7-204ENST00000419169 2483 ntAPPRIS ALT2 TSL 216.43■□□□□ 0.229e-7■□□□□ 10
NCBP2P52298 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.219e-7■□□□□ 10
NCBP2P52298 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.219e-7■□□□□ 10
NCBP2P52298 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.149e-7■□□□□ 10
NCBP2P52298 SMG7-206ENST00000444547 580 ntTSL 415.7■□□□□ 0.19e-7■□□□□ 10
NCBP2P52298 CCT7-208ENST00000471927 556 ntTSL 415.53■□□□□ 0.089e-16■□□□□ 10
NCBP2P52298 CCT7-209ENST00000473197 595 ntTSL 415.53■□□□□ 0.089e-16■□□□□ 10
NCBP2P52298 TPT1-AS1-220ENST00000524062 2285 ntTSL 215.52■□□□□ 0.089e-7■□□□□ 10
NCBP2P52298 HJURP-208ENST00000453122 634 ntTSL 415.34■□□□□ 0.057e-11■□□□□ 10
NCBP2P52298 SMG7-213ENST00000507691 760 ntTSL 515.31■□□□□ 0.049e-7■□□□□ 10
NCBP2P52298 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.23■□□□□ 0.039e-16■□□□□ 10
NCBP2P52298 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -09e-7■□□□□ 10
NCBP2P52298 CCT7-206ENST00000464397 583 ntTSL 214.94□□□□□ -0.029e-16■□□□□ 10
NCBP2P52298 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.9□□□□□ -0.029e-7■□□□□ 10
NCBP2P52298 S100PBP-212ENST00000529027 429 ntTSL 314.88□□□□□ -0.039e-7■□□□□ 10
NCBP2P52298 BCS1L-206ENST00000423377 583 ntTSL 314.74□□□□□ -0.059e-7■□□□□ 10
NCBP2P52298 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.119e-7■□□□□ 10
NCBP2P52298 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.139e-7■□□□□ 10
NCBP2P52298 TMEM199-203ENST00000483505 735 ntTSL 514.13□□□□□ -0.159e-7■□□□□ 10
NCBP2P52298 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.189e-7■□□□□ 10
NCBP2P52298 CCT7-207ENST00000469844 612 ntTSL 413.77□□□□□ -0.219e-16■□□□□ 10
NCBP2P52298 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.68□□□□□ -0.229e-7■□□□□ 10
NCBP2P52298 POLDIP3-206ENST00000454057 579 ntTSL 413.68□□□□□ -0.229e-7■□□□□ 10
NCBP2P52298 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.239e-16■□□□□ 10
NCBP2P52298 CCT7-205ENST00000461290 1018 ntTSL 213.62□□□□□ -0.239e-16■□□□□ 10
NCBP2P52298 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.62□□□□□ -0.239e-7■□□□□ 10
NCBP2P52298 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.259e-7■□□□□ 10
NCBP2P52298 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC12.76□□□□□ -0.379e-7■□□□□ 10
Retrieved 100 of 18,329 protein–RNA pairs in 166.3 ms