Protein–RNA interactions for Protein: P51801

CLCNKB, Chloride channel protein ClC-Kb, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKBP51801 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLCNKBP51801 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLCNKBP51801 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLCNKBP51801 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLCNKBP51801 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CLCNKBP51801 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CLCNKBP51801 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.5■□□□□ 0.55
CLCNKBP51801 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.5■□□□□ 0.55
CLCNKBP51801 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CLCNKBP51801 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.5■□□□□ 0.55
CLCNKBP51801 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.5■□□□□ 0.55
CLCNKBP51801 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.5■□□□□ 0.55
CLCNKBP51801 MIR3687-2-201ENST00000577708 61 ntBASIC18.5■□□□□ 0.55
CLCNKBP51801 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.5■□□□□ 0.55
CLCNKBP51801 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.5■□□□□ 0.55
CLCNKBP51801 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.5■□□□□ 0.55
CLCNKBP51801 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.5■□□□□ 0.55
CLCNKBP51801 MTDHP5-201ENST00000598980 586 ntBASIC18.5■□□□□ 0.55
CLCNKBP51801 MIR3687-1-201ENST00000614492 61 ntBASIC18.5■□□□□ 0.55
CLCNKBP51801 AC010507.1-201ENST00000633895 436 ntBASIC18.5■□□□□ 0.55
CLCNKBP51801 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLCNKBP51801 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.5■□□□□ 0.55
CLCNKBP51801 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CLCNKBP51801 AC002310.6-201ENST00000624451 1377 ntBASIC18.5■□□□□ 0.55
CLCNKBP51801 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.5■□□□□ 0.55
CLCNKBP51801 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLCNKBP51801 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLCNKBP51801 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.5■□□□□ 0.55
CLCNKBP51801 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLCNKBP51801 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLCNKBP51801 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLCNKBP51801 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLCNKBP51801 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLCNKBP51801 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.49■□□□□ 0.55
CLCNKBP51801 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
CLCNKBP51801 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.49■□□□□ 0.55
CLCNKBP51801 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLCNKBP51801 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLCNKBP51801 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.49■□□□□ 0.55
CLCNKBP51801 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLCNKBP51801 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLCNKBP51801 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.49■□□□□ 0.55
CLCNKBP51801 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.49■□□□□ 0.55
CLCNKBP51801 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.49■□□□□ 0.55
CLCNKBP51801 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.49■□□□□ 0.55
CLCNKBP51801 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.49■□□□□ 0.55
CLCNKBP51801 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLCNKBP51801 AL691403.2-201ENST00000618460 490 ntBASIC18.49■□□□□ 0.55
CLCNKBP51801 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.49■□□□□ 0.55
CLCNKBP51801 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLCNKBP51801 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLCNKBP51801 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.49■□□□□ 0.55
CLCNKBP51801 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLCNKBP51801 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLCNKBP51801 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CLCNKBP51801 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLCNKBP51801 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLCNKBP51801 AC134043.2-201ENST00000624206 2238 ntBASIC18.49■□□□□ 0.55
CLCNKBP51801 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLCNKBP51801 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
CLCNKBP51801 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCNKBP51801 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CLCNKBP51801 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.48■□□□□ 0.55
CLCNKBP51801 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCNKBP51801 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCNKBP51801 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCNKBP51801 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCNKBP51801 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCNKBP51801 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCNKBP51801 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLCNKBP51801 MCCD1P2-201ENST00000423228 335 ntBASIC18.48■□□□□ 0.55
CLCNKBP51801 PAWRP1-201ENST00000451083 565 ntBASIC18.48■□□□□ 0.55
CLCNKBP51801 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.48■□□□□ 0.55
CLCNKBP51801 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CLCNKBP51801 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.48■□□□□ 0.55
CLCNKBP51801 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCNKBP51801 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.48■□□□□ 0.55
CLCNKBP51801 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.48■□□□□ 0.55
CLCNKBP51801 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.48■□□□□ 0.55
CLCNKBP51801 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLCNKBP51801 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
CLCNKBP51801 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLCNKBP51801 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCNKBP51801 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CLCNKBP51801 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCNKBP51801 AC018470.1-201ENST00000624790 3129 ntBASIC18.47■□□□□ 0.55
CLCNKBP51801 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CLCNKBP51801 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLCNKBP51801 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCNKBP51801 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCNKBP51801 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
CLCNKBP51801 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCNKBP51801 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLCNKBP51801 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.47■□□□□ 0.55
CLCNKBP51801 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.47■□□□□ 0.55
CLCNKBP51801 AC096734.2-201ENST00000562054 433 ntBASIC18.47■□□□□ 0.55
CLCNKBP51801 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLCNKBP51801 AC004877.2-201ENST00000623941 599 ntBASIC18.47■□□□□ 0.55
CLCNKBP51801 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.47■□□□□ 0.55
CLCNKBP51801 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms