Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLCN3P51790 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLCN3P51790 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLCN3P51790 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.05■□□□□ 0.64
CLCN3P51790 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.05■□□□□ 0.64
CLCN3P51790 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.05■□□□□ 0.64
CLCN3P51790 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLCN3P51790 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.05■□□□□ 0.64
CLCN3P51790 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.05■□□□□ 0.64
CLCN3P51790 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.05■□□□□ 0.64
CLCN3P51790 DNAJB3-201ENST00000446806 729 ntBASIC19.05■□□□□ 0.64
CLCN3P51790 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.05■□□□□ 0.64
CLCN3P51790 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.05■□□□□ 0.64
CLCN3P51790 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.05■□□□□ 0.64
CLCN3P51790 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLCN3P51790 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLCN3P51790 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.05■□□□□ 0.64
CLCN3P51790 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLCN3P51790 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CLCN3P51790 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLCN3P51790 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.05■□□□□ 0.64
CLCN3P51790 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLCN3P51790 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLCN3P51790 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLCN3P51790 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLCN3P51790 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CLCN3P51790 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLCN3P51790 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
CLCN3P51790 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CLCN3P51790 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLCN3P51790 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CLCN3P51790 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.04■□□□□ 0.64
CLCN3P51790 HCG11-201ENST00000411553 5696 ntBASIC19.04■□□□□ 0.64
CLCN3P51790 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLCN3P51790 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLCN3P51790 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CLCN3P51790 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.04■□□□□ 0.64
CLCN3P51790 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.04■□□□□ 0.64
CLCN3P51790 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLCN3P51790 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.04■□□□□ 0.64
CLCN3P51790 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.04■□□□□ 0.64
CLCN3P51790 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CLCN3P51790 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.04■□□□□ 0.64
CLCN3P51790 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLCN3P51790 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.04■□□□□ 0.64
CLCN3P51790 AL691403.2-201ENST00000618460 490 ntBASIC19.04■□□□□ 0.64
CLCN3P51790 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CLCN3P51790 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLCN3P51790 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLCN3P51790 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.04■□□□□ 0.64
CLCN3P51790 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLCN3P51790 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.04■□□□□ 0.64
CLCN3P51790 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CLCN3P51790 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLCN3P51790 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLCN3P51790 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLCN3P51790 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CLCN3P51790 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLCN3P51790 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLCN3P51790 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLCN3P51790 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.03■□□□□ 0.64
CLCN3P51790 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLCN3P51790 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.03■□□□□ 0.64
CLCN3P51790 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLCN3P51790 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLCN3P51790 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.03■□□□□ 0.64
CLCN3P51790 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.03■□□□□ 0.64
CLCN3P51790 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.03■□□□□ 0.64
CLCN3P51790 MIR3687-2-201ENST00000577708 61 ntBASIC19.03■□□□□ 0.64
CLCN3P51790 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.03■□□□□ 0.64
CLCN3P51790 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.03■□□□□ 0.64
CLCN3P51790 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.03■□□□□ 0.64
CLCN3P51790 MIR3687-1-201ENST00000614492 61 ntBASIC19.03■□□□□ 0.64
CLCN3P51790 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.03■□□□□ 0.64
CLCN3P51790 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLCN3P51790 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.03■□□□□ 0.64
CLCN3P51790 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CLCN3P51790 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CLCN3P51790 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLCN3P51790 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLCN3P51790 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLCN3P51790 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLCN3P51790 AC002310.6-201ENST00000624451 1377 ntBASIC19.03■□□□□ 0.64
CLCN3P51790 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLCN3P51790 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLCN3P51790 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLCN3P51790 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CLCN3P51790 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.03■□□□□ 0.64
CLCN3P51790 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLCN3P51790 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLCN3P51790 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLCN3P51790 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.02■□□□□ 0.64
CLCN3P51790 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLCN3P51790 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLCN3P51790 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CLCN3P51790 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLCN3P51790 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLCN3P51790 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.02■□□□□ 0.64
CLCN3P51790 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.02■□□□□ 0.64
CLCN3P51790 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms