Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
RAB5CP51148 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5CP51148 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5CP51148 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC14.01□□□□□ -0.17
RAB5CP51148 RNF216P1-203ENST00000404404 2427 ntBASIC14.01□□□□□ -0.17
RAB5CP51148 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.01□□□□□ -0.17
RAB5CP51148 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC14.01□□□□□ -0.17
RAB5CP51148 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5CP51148 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5CP51148 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
RAB5CP51148 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
RAB5CP51148 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5CP51148 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5CP51148 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5CP51148 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
RAB5CP51148 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5CP51148 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5CP51148 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5CP51148 AL023284.2-201ENST00000405850 579 ntBASIC14.01□□□□□ -0.17
RAB5CP51148 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5CP51148 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5CP51148 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC14.01□□□□□ -0.17
RAB5CP51148 OR2A1-AS1-207ENST00000486094 819 ntBASIC14.01□□□□□ -0.17
RAB5CP51148 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5CP51148 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC14.01□□□□□ -0.17
RAB5CP51148 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5CP51148 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC14.01□□□□□ -0.17
RAB5CP51148 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5CP51148 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5CP51148 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
RAB5CP51148 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.01□□□□□ -0.17
RAB5CP51148 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5CP51148 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5CP51148 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5CP51148 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5CP51148 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC14.01□□□□□ -0.17
RAB5CP51148 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.01□□□□□ -0.17
RAB5CP51148 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5CP51148 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5CP51148 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5CP51148 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5CP51148 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
RAB5CP51148 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5CP51148 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
RAB5CP51148 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5CP51148 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5CP51148 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5CP51148 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5CP51148 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC14.01□□□□□ -0.17
RAB5CP51148 AC036111.1-201ENST00000533973 1582 ntBASIC14□□□□□ -0.17
RAB5CP51148 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB5CP51148 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB5CP51148 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
RAB5CP51148 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB5CP51148 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
RAB5CP51148 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB5CP51148 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14□□□□□ -0.17
RAB5CP51148 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB5CP51148 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB5CP51148 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB5CP51148 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB5CP51148 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB5CP51148 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14□□□□□ -0.17
RAB5CP51148 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC14□□□□□ -0.17
RAB5CP51148 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB5CP51148 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB5CP51148 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
RAB5CP51148 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
RAB5CP51148 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC14□□□□□ -0.17
RAB5CP51148 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14□□□□□ -0.17
RAB5CP51148 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB5CP51148 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB5CP51148 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
RAB5CP51148 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
RAB5CP51148 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC14□□□□□ -0.17
RAB5CP51148 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB5CP51148 F2R-202ENST00000505600 442 ntTSL 2 BASIC14□□□□□ -0.17
RAB5CP51148 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB5CP51148 PHB2-213ENST00000546111 858 ntTSL 2 BASIC14□□□□□ -0.17
RAB5CP51148 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC14□□□□□ -0.17
RAB5CP51148 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC14□□□□□ -0.17
RAB5CP51148 VPS53-216ENST00000574029 585 ntTSL 4 BASIC14□□□□□ -0.17
RAB5CP51148 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC14□□□□□ -0.17
RAB5CP51148 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC14□□□□□ -0.17
RAB5CP51148 AL445675.2-201ENST00000620291 557 ntBASIC14□□□□□ -0.17
RAB5CP51148 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC14□□□□□ -0.17
RAB5CP51148 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB5CP51148 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
RAB5CP51148 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
RAB5CP51148 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB5CP51148 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
RAB5CP51148 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB5CP51148 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14□□□□□ -0.17
RAB5CP51148 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14□□□□□ -0.17
RAB5CP51148 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
RAB5CP51148 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB5CP51148 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
RAB5CP51148 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB5CP51148 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RAB5CP51148 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms