Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.19■□□□□ 0.18
RNF144AP50876 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF144AP50876 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF144AP50876 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF144AP50876 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF144AP50876 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF144AP50876 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.19■□□□□ 0.18
RNF144AP50876 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RNF144AP50876 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF144AP50876 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF144AP50876 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.19■□□□□ 0.18
RNF144AP50876 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF144AP50876 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF144AP50876 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RNF144AP50876 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.19■□□□□ 0.18
RNF144AP50876 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
RNF144AP50876 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF144AP50876 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.19■□□□□ 0.18
RNF144AP50876 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.19■□□□□ 0.18
RNF144AP50876 AC091076.1-201ENST00000610741 619 ntBASIC16.19■□□□□ 0.18
RNF144AP50876 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF144AP50876 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF144AP50876 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF144AP50876 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RNF144AP50876 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF144AP50876 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF144AP50876 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF144AP50876 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF144AP50876 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF144AP50876 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RNF144AP50876 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF144AP50876 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.19■□□□□ 0.18
RNF144AP50876 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF144AP50876 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.19■□□□□ 0.18
RNF144AP50876 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RNF144AP50876 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF144AP50876 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF144AP50876 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF144AP50876 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RNF144AP50876 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RNF144AP50876 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF144AP50876 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RNF144AP50876 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF144AP50876 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF144AP50876 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF144AP50876 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF144AP50876 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RNF144AP50876 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.18■□□□□ 0.18
RNF144AP50876 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.18■□□□□ 0.18
RNF144AP50876 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.18■□□□□ 0.18
RNF144AP50876 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RNF144AP50876 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.18■□□□□ 0.18
RNF144AP50876 KRT17P6-201ENST00000453795 1220 ntBASIC16.18■□□□□ 0.18
RNF144AP50876 VENTXP7-201ENST00000475503 772 ntBASIC16.18■□□□□ 0.18
RNF144AP50876 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF144AP50876 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RNF144AP50876 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.18■□□□□ 0.18
RNF144AP50876 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.18■□□□□ 0.18
RNF144AP50876 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF144AP50876 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF144AP50876 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF144AP50876 AL353801.3-201ENST00000609898 542 ntBASIC16.18■□□□□ 0.18
RNF144AP50876 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.18■□□□□ 0.18
RNF144AP50876 AC244517.3-201ENST00000616254 1235 ntBASIC16.18■□□□□ 0.18
RNF144AP50876 LINC01451-201ENST00000623792 534 ntBASIC16.18■□□□□ 0.18
RNF144AP50876 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.18■□□□□ 0.18
RNF144AP50876 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RNF144AP50876 AC084018.2-201ENST00000613093 2607 ntBASIC16.18■□□□□ 0.18
RNF144AP50876 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF144AP50876 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF144AP50876 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RNF144AP50876 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF144AP50876 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RNF144AP50876 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RNF144AP50876 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF144AP50876 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF144AP50876 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF144AP50876 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF144AP50876 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.17■□□□□ 0.18
RNF144AP50876 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF144AP50876 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RNF144AP50876 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF144AP50876 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF144AP50876 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.17■□□□□ 0.18
RNF144AP50876 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF144AP50876 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RNF144AP50876 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.17■□□□□ 0.18
RNF144AP50876 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RNF144AP50876 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.17■□□□□ 0.18
RNF144AP50876 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF144AP50876 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF144AP50876 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF144AP50876 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF144AP50876 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.17■□□□□ 0.18
RNF144AP50876 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RNF144AP50876 DRAXINP1-201ENST00000437611 948 ntBASIC16.17■□□□□ 0.18
RNF144AP50876 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.17■□□□□ 0.18
RNF144AP50876 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF144AP50876 AC138894.3-201ENST00000603787 634 ntBASIC16.17■□□□□ 0.18
RNF144AP50876 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms