Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC6A12P48065 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SLC6A12P48065 AC004817.3-201ENST00000602957 2129 ntBASIC16.76■□□□□ 0.27
SLC6A12P48065 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC6A12P48065 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
SLC6A12P48065 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC6A12P48065 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC6A12P48065 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC6A12P48065 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC6A12P48065 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.75■□□□□ 0.27
SLC6A12P48065 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC6A12P48065 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC6A12P48065 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC6A12P48065 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SLC6A12P48065 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SLC6A12P48065 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC6A12P48065 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC6A12P48065 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SLC6A12P48065 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC6A12P48065 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC6A12P48065 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC6A12P48065 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC6A12P48065 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.75■□□□□ 0.27
SLC6A12P48065 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC6A12P48065 TSPY19P-201ENST00000418461 509 ntBASIC16.75■□□□□ 0.27
SLC6A12P48065 ACTG1P4-201ENST00000425123 1122 ntBASIC16.75■□□□□ 0.27
SLC6A12P48065 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.75■□□□□ 0.27
SLC6A12P48065 TSPY18P-201ENST00000441642 509 ntBASIC16.75■□□□□ 0.27
SLC6A12P48065 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC6A12P48065 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.75■□□□□ 0.27
SLC6A12P48065 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.75■□□□□ 0.27
SLC6A12P48065 AL732292.2-201ENST00000609649 430 ntBASIC16.75■□□□□ 0.27
SLC6A12P48065 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.75■□□□□ 0.27
SLC6A12P48065 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC6A12P48065 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC6A12P48065 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SLC6A12P48065 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC6A12P48065 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC6A12P48065 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SLC6A12P48065 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC6A12P48065 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC6A12P48065 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC6A12P48065 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC6A12P48065 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
SLC6A12P48065 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SLC6A12P48065 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SLC6A12P48065 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC6A12P48065 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC6A12P48065 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SLC6A12P48065 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC6A12P48065 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC6A12P48065 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC6A12P48065 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC6A12P48065 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC6A12P48065 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC6A12P48065 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SLC6A12P48065 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC6A12P48065 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC6A12P48065 HCG11-201ENST00000411553 5696 ntBASIC16.74■□□□□ 0.27
SLC6A12P48065 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC6A12P48065 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SLC6A12P48065 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SLC6A12P48065 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC6A12P48065 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC6A12P48065 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC6A12P48065 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC6A12P48065 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC6A12P48065 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC6A12P48065 KRT18P31-201ENST00000506277 1292 ntBASIC16.74■□□□□ 0.27
SLC6A12P48065 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.74■□□□□ 0.27
SLC6A12P48065 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC6A12P48065 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC6A12P48065 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC6A12P48065 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC6A12P48065 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC6A12P48065 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC6A12P48065 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC6A12P48065 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC6A12P48065 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC6A12P48065 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC6A12P48065 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC6A12P48065 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SLC6A12P48065 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC6A12P48065 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC6A12P48065 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC6A12P48065 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC6A12P48065 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC6A12P48065 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SLC6A12P48065 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC6A12P48065 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC6A12P48065 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC6A12P48065 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC6A12P48065 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC6A12P48065 RBM17P3-201ENST00000417687 1192 ntBASIC16.73■□□□□ 0.27
SLC6A12P48065 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SLC6A12P48065 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC6A12P48065 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC6A12P48065 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC6A12P48065 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC6A12P48065 AL121772.3-201ENST00000610840 674 ntBASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms