Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.53■□□□□ 0.24
RORAP35398 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.53■□□□□ 0.24
RORAP35398 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RORAP35398 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RORAP35398 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RORAP35398 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RORAP35398 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RORAP35398 ELK2BP-201ENST00000415014 1224 ntBASIC16.53■□□□□ 0.24
RORAP35398 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.53■□□□□ 0.24
RORAP35398 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.53■□□□□ 0.24
RORAP35398 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.53■□□□□ 0.24
RORAP35398 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RORAP35398 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.53■□□□□ 0.24
RORAP35398 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.53■□□□□ 0.24
RORAP35398 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RORAP35398 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.53■□□□□ 0.24
RORAP35398 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
RORAP35398 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RORAP35398 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
RORAP35398 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RORAP35398 AC008764.6-201ENST00000595909 2069 ntBASIC16.53■□□□□ 0.24
RORAP35398 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.53■□□□□ 0.24
RORAP35398 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.53■□□□□ 0.24
RORAP35398 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RORAP35398 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RORAP35398 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RORAP35398 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RORAP35398 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RORAP35398 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RORAP35398 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RORAP35398 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RORAP35398 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RORAP35398 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RORAP35398 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RORAP35398 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
RORAP35398 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.52■□□□□ 0.24
RORAP35398 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
RORAP35398 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
RORAP35398 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RORAP35398 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RORAP35398 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RORAP35398 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RORAP35398 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.52■□□□□ 0.24
RORAP35398 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
RORAP35398 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
RORAP35398 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
RORAP35398 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RORAP35398 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RORAP35398 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RORAP35398 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.52■□□□□ 0.24
RORAP35398 BX842568.4-201ENST00000421222 227 ntBASIC16.52■□□□□ 0.24
RORAP35398 KRT18P3-201ENST00000451602 1288 ntBASIC16.52■□□□□ 0.24
RORAP35398 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
RORAP35398 STK19B-204ENST00000512515 211 ntBASIC16.52■□□□□ 0.24
RORAP35398 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.52■□□□□ 0.24
RORAP35398 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.52■□□□□ 0.24
RORAP35398 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.52■□□□□ 0.24
RORAP35398 AC139530.3-201ENST00000620344 690 ntBASIC16.52■□□□□ 0.24
RORAP35398 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.52■□□□□ 0.24
RORAP35398 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
RORAP35398 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
RORAP35398 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RORAP35398 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RORAP35398 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RORAP35398 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RORAP35398 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RORAP35398 AC006504.4-201ENST00000592118 1568 ntBASIC16.51■□□□□ 0.23
RORAP35398 AC009336.1-201ENST00000608941 1553 ntBASIC16.51■□□□□ 0.23
RORAP35398 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RORAP35398 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
RORAP35398 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RORAP35398 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RORAP35398 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RORAP35398 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RORAP35398 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
RORAP35398 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.51■□□□□ 0.23
RORAP35398 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.51■□□□□ 0.23
RORAP35398 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RORAP35398 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.51■□□□□ 0.23
RORAP35398 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RORAP35398 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.51■□□□□ 0.23
RORAP35398 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.51■□□□□ 0.23
RORAP35398 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
RORAP35398 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RORAP35398 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.51■□□□□ 0.23
RORAP35398 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.51■□□□□ 0.23
RORAP35398 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RORAP35398 AC092865.5-201ENST00000545435 363 ntBASIC16.51■□□□□ 0.23
RORAP35398 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.51■□□□□ 0.23
RORAP35398 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.51■□□□□ 0.23
RORAP35398 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.51■□□□□ 0.23
RORAP35398 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.51■□□□□ 0.23
RORAP35398 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RORAP35398 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.51■□□□□ 0.23
RORAP35398 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RORAP35398 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RORAP35398 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RORAP35398 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RORAP35398 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RORAP35398 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms