Protein–RNA interactions for Protein: P28222

HTR1B, 5-hydroxytryptamine receptor 1B, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1BP28222 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTR1BP28222 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.35■□□□□ 0.37
HTR1BP28222 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
HTR1BP28222 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
HTR1BP28222 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HTR1BP28222 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.34■□□□□ 0.37
HTR1BP28222 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HTR1BP28222 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
HTR1BP28222 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HTR1BP28222 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HTR1BP28222 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.34■□□□□ 0.37
HTR1BP28222 MYCLP1-201ENST00000372451 1075 ntBASIC17.34■□□□□ 0.37
HTR1BP28222 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HTR1BP28222 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HTR1BP28222 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HTR1BP28222 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
HTR1BP28222 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HTR1BP28222 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.34■□□□□ 0.37
HTR1BP28222 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.34■□□□□ 0.37
HTR1BP28222 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.34■□□□□ 0.37
HTR1BP28222 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.34■□□□□ 0.37
HTR1BP28222 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HTR1BP28222 KRT18P58-201ENST00000527480 1120 ntBASIC17.34■□□□□ 0.37
HTR1BP28222 SLC25A1P1-201ENST00000528351 927 ntBASIC17.34■□□□□ 0.37
HTR1BP28222 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HTR1BP28222 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.34■□□□□ 0.37
HTR1BP28222 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HTR1BP28222 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
HTR1BP28222 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HTR1BP28222 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HTR1BP28222 LINC00896-202ENST00000609602 2128 ntBASIC17.34■□□□□ 0.37
HTR1BP28222 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HTR1BP28222 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
HTR1BP28222 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HTR1BP28222 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
HTR1BP28222 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.33■□□□□ 0.37
HTR1BP28222 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
HTR1BP28222 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
HTR1BP28222 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HTR1BP28222 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HTR1BP28222 AC132938.5-201ENST00000624980 1813 ntBASIC17.33■□□□□ 0.37
HTR1BP28222 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.33■□□□□ 0.37
HTR1BP28222 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HTR1BP28222 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HTR1BP28222 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HTR1BP28222 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HTR1BP28222 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.33■□□□□ 0.36
HTR1BP28222 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HTR1BP28222 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HTR1BP28222 MIR574-201ENST00000385209 96 ntBASIC17.33■□□□□ 0.36
HTR1BP28222 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HTR1BP28222 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.33■□□□□ 0.36
HTR1BP28222 AL589182.2-201ENST00000619332 1049 ntBASIC17.33■□□□□ 0.36
HTR1BP28222 AC117500.6-201ENST00000624871 588 ntBASIC17.33■□□□□ 0.36
HTR1BP28222 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HTR1BP28222 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.33■□□□□ 0.36
HTR1BP28222 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
HTR1BP28222 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HTR1BP28222 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
HTR1BP28222 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HTR1BP28222 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HTR1BP28222 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
HTR1BP28222 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
HTR1BP28222 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.33■□□□□ 0.36
HTR1BP28222 AC138028.4-201ENST00000564984 1845 ntBASIC17.33■□□□□ 0.36
HTR1BP28222 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.33■□□□□ 0.36
HTR1BP28222 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HTR1BP28222 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HTR1BP28222 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HTR1BP28222 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HTR1BP28222 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
HTR1BP28222 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.32■□□□□ 0.36
HTR1BP28222 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HTR1BP28222 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
HTR1BP28222 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HTR1BP28222 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HTR1BP28222 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HTR1BP28222 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HTR1BP28222 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.32■□□□□ 0.36
HTR1BP28222 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HTR1BP28222 AC004817.3-201ENST00000602957 2129 ntBASIC17.32■□□□□ 0.36
HTR1BP28222 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HTR1BP28222 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.32■□□□□ 0.36
HTR1BP28222 PCDHA12-202ENST00000613593 2588 ntBASIC17.32■□□□□ 0.36
HTR1BP28222 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
HTR1BP28222 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.32■□□□□ 0.36
HTR1BP28222 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
HTR1BP28222 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
HTR1BP28222 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.32■□□□□ 0.36
HTR1BP28222 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.32■□□□□ 0.36
HTR1BP28222 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HTR1BP28222 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.32■□□□□ 0.36
HTR1BP28222 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HTR1BP28222 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.32■□□□□ 0.36
HTR1BP28222 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
HTR1BP28222 AC002558.1-201ENST00000488906 803 ntBASIC17.32■□□□□ 0.36
HTR1BP28222 STK19B-204ENST00000512515 211 ntBASIC17.32■□□□□ 0.36
HTR1BP28222 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.32■□□□□ 0.36
HTR1BP28222 AC019129.2-201ENST00000609837 1235 ntBASIC17.32■□□□□ 0.36
HTR1BP28222 PGM5P2-202ENST00000637225 1043 ntBASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms