Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
COL8A2P25067 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.7□□□□□ -0.06
COL8A2P25067 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL8A2P25067 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
COL8A2P25067 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL8A2P25067 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL8A2P25067 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
COL8A2P25067 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
COL8A2P25067 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL8A2P25067 AC097637.2-201ENST00000624096 1997 ntBASIC14.69□□□□□ -0.06
COL8A2P25067 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.69□□□□□ -0.06
COL8A2P25067 AC006504.4-201ENST00000592118 1568 ntBASIC14.69□□□□□ -0.06
COL8A2P25067 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
COL8A2P25067 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
COL8A2P25067 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL8A2P25067 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14.69□□□□□ -0.06
COL8A2P25067 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL8A2P25067 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
COL8A2P25067 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.69□□□□□ -0.06
COL8A2P25067 MYCLP1-201ENST00000372451 1075 ntBASIC14.69□□□□□ -0.06
COL8A2P25067 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.69□□□□□ -0.06
COL8A2P25067 AC005104.2-201ENST00000427818 678 ntBASIC14.69□□□□□ -0.06
COL8A2P25067 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.69□□□□□ -0.06
COL8A2P25067 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.69□□□□□ -0.06
COL8A2P25067 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.69□□□□□ -0.06
COL8A2P25067 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
COL8A2P25067 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.69□□□□□ -0.06
COL8A2P25067 AC023511.2-201ENST00000618803 211 ntBASIC14.69□□□□□ -0.06
COL8A2P25067 AC005593.1-201ENST00000624894 515 ntBASIC14.69□□□□□ -0.06
COL8A2P25067 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.69□□□□□ -0.06
COL8A2P25067 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
COL8A2P25067 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL8A2P25067 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
COL8A2P25067 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL8A2P25067 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
COL8A2P25067 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
COL8A2P25067 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL8A2P25067 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
COL8A2P25067 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL8A2P25067 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL8A2P25067 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
COL8A2P25067 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
COL8A2P25067 PMS2P7-201ENST00000506558 1336 ntBASIC14.68□□□□□ -0.06
COL8A2P25067 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.68□□□□□ -0.06
COL8A2P25067 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COL8A2P25067 NCF1C-201ENST00000438382 1427 ntBASIC14.68□□□□□ -0.06
COL8A2P25067 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL8A2P25067 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
COL8A2P25067 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL8A2P25067 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL8A2P25067 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC14.68□□□□□ -0.06
COL8A2P25067 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL8A2P25067 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.68□□□□□ -0.06
COL8A2P25067 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL8A2P25067 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
COL8A2P25067 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.68□□□□□ -0.06
COL8A2P25067 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.68□□□□□ -0.06
COL8A2P25067 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.68□□□□□ -0.06
COL8A2P25067 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.68□□□□□ -0.06
COL8A2P25067 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.68□□□□□ -0.06
COL8A2P25067 PGM5P2-202ENST00000637225 1043 ntBASIC14.68□□□□□ -0.06
COL8A2P25067 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
COL8A2P25067 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL8A2P25067 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
COL8A2P25067 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.68□□□□□ -0.06
COL8A2P25067 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
COL8A2P25067 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.68□□□□□ -0.06
COL8A2P25067 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL8A2P25067 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.68□□□□□ -0.06
COL8A2P25067 AC012317.2-201ENST00000623305 2251 ntBASIC14.68□□□□□ -0.06
COL8A2P25067 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL8A2P25067 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL8A2P25067 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
COL8A2P25067 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL8A2P25067 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.68□□□□□ -0.06
COL8A2P25067 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL8A2P25067 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL8A2P25067 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL8A2P25067 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.68□□□□□ -0.06
COL8A2P25067 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC14.68□□□□□ -0.06
COL8A2P25067 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COL8A2P25067 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COL8A2P25067 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
COL8A2P25067 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.67□□□□□ -0.06
COL8A2P25067 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COL8A2P25067 AC008764.6-201ENST00000595909 2069 ntBASIC14.67□□□□□ -0.06
COL8A2P25067 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.67□□□□□ -0.06
COL8A2P25067 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.67□□□□□ -0.06
COL8A2P25067 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
COL8A2P25067 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COL8A2P25067 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
COL8A2P25067 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.67□□□□□ -0.06
COL8A2P25067 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.67□□□□□ -0.06
COL8A2P25067 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL8A2P25067 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL8A2P25067 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.67□□□□□ -0.06
COL8A2P25067 AC009947.1-201ENST00000444350 727 ntBASIC14.67□□□□□ -0.06
COL8A2P25067 AC136632.2-201ENST00000512891 861 ntBASIC14.67□□□□□ -0.06
COL8A2P25067 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.67□□□□□ -0.06
COL8A2P25067 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms