Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CHMP24386 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.28■□□□□ 0.2
CHMP24386 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.28■□□□□ 0.2
CHMP24386 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.28■□□□□ 0.2
CHMP24386 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
CHMP24386 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP24386 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP24386 REXO1L11P-201ENST00000620964 1927 ntBASIC16.28■□□□□ 0.2
CHMP24386 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP24386 AL450487.1-201ENST00000426799 995 ntBASIC16.28■□□□□ 0.2
CHMP24386 AC068472.1-201ENST00000474589 881 ntBASIC16.28■□□□□ 0.2
CHMP24386 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.28■□□□□ 0.2
CHMP24386 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.28■□□□□ 0.2
CHMP24386 PRELID1P1-202ENST00000567272 903 ntBASIC16.28■□□□□ 0.2
CHMP24386 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP24386 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.28■□□□□ 0.2
CHMP24386 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.28■□□□□ 0.2
CHMP24386 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP24386 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP24386 AL691432.3-201ENST00000621860 400 ntBASIC16.28■□□□□ 0.2
CHMP24386 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.28■□□□□ 0.2
CHMP24386 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP24386 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP24386 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.28■□□□□ 0.2
CHMP24386 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP24386 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CHMP24386 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CHMP24386 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP24386 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
CHMP24386 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CHMP24386 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP24386 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CHMP24386 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP24386 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.28■□□□□ 0.2
CHMP24386 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP24386 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP24386 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP24386 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.27■□□□□ 0.2
CHMP24386 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.27■□□□□ 0.2
CHMP24386 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CHMP24386 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP24386 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP24386 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP24386 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP24386 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP24386 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP24386 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP24386 DUSP5P1-201ENST00000441325 1139 ntBASIC16.27■□□□□ 0.2
CHMP24386 AC104819.1-201ENST00000504587 486 ntBASIC16.27■□□□□ 0.2
CHMP24386 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.27■□□□□ 0.2
CHMP24386 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.27■□□□□ 0.2
CHMP24386 AP000867.3-201ENST00000524675 377 ntBASIC16.27■□□□□ 0.2
CHMP24386 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.27■□□□□ 0.2
CHMP24386 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.27■□□□□ 0.2
CHMP24386 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP24386 LINC01451-201ENST00000623792 534 ntBASIC16.27■□□□□ 0.2
CHMP24386 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHMP24386 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.27■□□□□ 0.19
CHMP24386 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.27■□□□□ 0.19
CHMP24386 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHMP24386 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHMP24386 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHMP24386 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHMP24386 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHMP24386 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHMP24386 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CHMP24386 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHMP24386 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CHMP24386 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.26■□□□□ 0.19
CHMP24386 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
CHMP24386 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CHMP24386 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.26■□□□□ 0.19
CHMP24386 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
CHMP24386 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP24386 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP24386 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP24386 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP24386 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP24386 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP24386 AL391005.1-201ENST00000623953 2435 ntBASIC16.26■□□□□ 0.19
CHMP24386 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.26■□□□□ 0.19
CHMP24386 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP24386 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP24386 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP24386 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP24386 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CHMP24386 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP24386 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP24386 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CHMP24386 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.26■□□□□ 0.19
CHMP24386 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.26■□□□□ 0.19
CHMP24386 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.26■□□□□ 0.19
CHMP24386 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.26■□□□□ 0.19
CHMP24386 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP24386 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.26■□□□□ 0.19
CHMP24386 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.26■□□□□ 0.19
CHMP24386 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.26■□□□□ 0.19
CHMP24386 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CHMP24386 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.26■□□□□ 0.19
CHMP24386 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms