Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.89■□□□□ 0.45
ERCC2P18074 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.89■□□□□ 0.45
ERCC2P18074 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
ERCC2P18074 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ERCC2P18074 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ERCC2P18074 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ERCC2P18074 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ERCC2P18074 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ERCC2P18074 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
ERCC2P18074 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ERCC2P18074 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ERCC2P18074 AC093525.9-201ENST00000624961 1746 ntBASIC17.89■□□□□ 0.45
ERCC2P18074 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ERCC2P18074 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ERCC2P18074 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ERCC2P18074 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
ERCC2P18074 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ERCC2P18074 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.89■□□□□ 0.45
ERCC2P18074 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
ERCC2P18074 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ERCC2P18074 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ERCC2P18074 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.88■□□□□ 0.45
ERCC2P18074 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ERCC2P18074 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ERCC2P18074 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.88■□□□□ 0.45
ERCC2P18074 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
ERCC2P18074 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ERCC2P18074 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.88■□□□□ 0.45
ERCC2P18074 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ERCC2P18074 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ERCC2P18074 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.88■□□□□ 0.45
ERCC2P18074 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.88■□□□□ 0.45
ERCC2P18074 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ERCC2P18074 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ERCC2P18074 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ERCC2P18074 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ERCC2P18074 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
ERCC2P18074 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.88■□□□□ 0.45
ERCC2P18074 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ERCC2P18074 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ERCC2P18074 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ERCC2P18074 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.88■□□□□ 0.45
ERCC2P18074 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
ERCC2P18074 AL355877.3-201ENST00000622820 899 ntBASIC17.88■□□□□ 0.45
ERCC2P18074 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
ERCC2P18074 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.88■□□□□ 0.45
ERCC2P18074 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ERCC2P18074 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.88■□□□□ 0.45
ERCC2P18074 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ERCC2P18074 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
ERCC2P18074 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ERCC2P18074 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.88■□□□□ 0.45
ERCC2P18074 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
ERCC2P18074 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ERCC2P18074 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ERCC2P18074 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.88■□□□□ 0.45
ERCC2P18074 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ERCC2P18074 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.88■□□□□ 0.45
ERCC2P18074 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC2P18074 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC2P18074 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC2P18074 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
ERCC2P18074 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
ERCC2P18074 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.87■□□□□ 0.45
ERCC2P18074 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC2P18074 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC2P18074 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
ERCC2P18074 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
ERCC2P18074 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
ERCC2P18074 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.87■□□□□ 0.45
ERCC2P18074 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.87■□□□□ 0.45
ERCC2P18074 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC2P18074 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC2P18074 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.87■□□□□ 0.45
ERCC2P18074 FGFR3P6-201ENST00000457012 610 ntBASIC17.87■□□□□ 0.45
ERCC2P18074 BX005266.1-201ENST00000473402 457 ntBASIC17.87■□□□□ 0.45
ERCC2P18074 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.87■□□□□ 0.45
ERCC2P18074 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.87■□□□□ 0.45
ERCC2P18074 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.87■□□□□ 0.45
ERCC2P18074 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.87■□□□□ 0.45
ERCC2P18074 NKAPP1-205ENST00000585790 367 ntBASIC17.87■□□□□ 0.45
ERCC2P18074 AC008608.2-201ENST00000606089 416 ntBASIC17.87■□□□□ 0.45
ERCC2P18074 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.87■□□□□ 0.45
ERCC2P18074 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.87■□□□□ 0.45
ERCC2P18074 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
ERCC2P18074 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC2P18074 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.87■□□□□ 0.45
ERCC2P18074 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC2P18074 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC2P18074 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC2P18074 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
ERCC2P18074 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
ERCC2P18074 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC2P18074 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
ERCC2P18074 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC2P18074 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC2P18074 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC2P18074 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
ERCC2P18074 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
ERCC2P18074 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms