Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.4■□□□□ 0.54
PTPN1P18031 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN1P18031 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
PTPN1P18031 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.4■□□□□ 0.54
PTPN1P18031 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PTPN1P18031 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PTPN1P18031 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PTPN1P18031 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PTPN1P18031 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.39■□□□□ 0.54
PTPN1P18031 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
PTPN1P18031 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PTPN1P18031 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
PTPN1P18031 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN1P18031 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN1P18031 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN1P18031 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
PTPN1P18031 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.39■□□□□ 0.53
PTPN1P18031 ELK2BP-201ENST00000415014 1224 ntBASIC18.39■□□□□ 0.53
PTPN1P18031 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN1P18031 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN1P18031 SLC25A1P1-201ENST00000528351 927 ntBASIC18.39■□□□□ 0.53
PTPN1P18031 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.39■□□□□ 0.53
PTPN1P18031 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.39■□□□□ 0.53
PTPN1P18031 AC117500.6-201ENST00000624871 588 ntBASIC18.39■□□□□ 0.53
PTPN1P18031 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN1P18031 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PTPN1P18031 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN1P18031 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN1P18031 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.39■□□□□ 0.53
PTPN1P18031 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PTPN1P18031 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN1P18031 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN1P18031 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN1P18031 AL138688.1-201ENST00000624851 1594 ntBASIC18.38■□□□□ 0.53
PTPN1P18031 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN1P18031 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN1P18031 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.38■□□□□ 0.53
PTPN1P18031 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN1P18031 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.38■□□□□ 0.53
PTPN1P18031 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.38■□□□□ 0.53
PTPN1P18031 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.38■□□□□ 0.53
PTPN1P18031 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.38■□□□□ 0.53
PTPN1P18031 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN1P18031 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN1P18031 RNA5SP415-201ENST00000517246 115 ntBASIC18.38■□□□□ 0.53
PTPN1P18031 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN1P18031 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.38■□□□□ 0.53
PTPN1P18031 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.38■□□□□ 0.53
PTPN1P18031 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.38■□□□□ 0.53
PTPN1P18031 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.38■□□□□ 0.53
PTPN1P18031 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.38■□□□□ 0.53
PTPN1P18031 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.38■□□□□ 0.53
PTPN1P18031 AF228730.7-201ENST00000641842 219 ntBASIC18.38■□□□□ 0.53
PTPN1P18031 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PTPN1P18031 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN1P18031 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PTPN1P18031 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN1P18031 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PTPN1P18031 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN1P18031 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN1P18031 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN1P18031 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PTPN1P18031 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN1P18031 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN1P18031 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN1P18031 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.37■□□□□ 0.53
PTPN1P18031 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PTPN1P18031 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.37■□□□□ 0.53
PTPN1P18031 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN1P18031 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
PTPN1P18031 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN1P18031 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.37■□□□□ 0.53
PTPN1P18031 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.37■□□□□ 0.53
PTPN1P18031 AC005593.1-201ENST00000624894 515 ntBASIC18.37■□□□□ 0.53
PTPN1P18031 PGM5P2-202ENST00000637225 1043 ntBASIC18.37■□□□□ 0.53
PTPN1P18031 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
PTPN1P18031 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN1P18031 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.37■□□□□ 0.53
PTPN1P18031 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.37■□□□□ 0.53
PTPN1P18031 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN1P18031 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN1P18031 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN1P18031 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PTPN1P18031 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN1P18031 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN1P18031 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN1P18031 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN1P18031 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN1P18031 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN1P18031 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN1P18031 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN1P18031 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN1P18031 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN1P18031 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN1P18031 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN1P18031 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN1P18031 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN1P18031 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
PTPN1P18031 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.36■□□□□ 0.53
PTPN1P18031 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms