Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.47■□□□□ 0.23
NCK1P16333 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCK1P16333 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NCK1P16333 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NCK1P16333 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NCK1P16333 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NCK1P16333 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.46■□□□□ 0.23
NCK1P16333 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NCK1P16333 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.46■□□□□ 0.23
NCK1P16333 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
NCK1P16333 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
NCK1P16333 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
NCK1P16333 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NCK1P16333 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
NCK1P16333 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.46■□□□□ 0.23
NCK1P16333 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NCK1P16333 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
NCK1P16333 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.46■□□□□ 0.23
NCK1P16333 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NCK1P16333 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.46■□□□□ 0.23
NCK1P16333 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.46■□□□□ 0.23
NCK1P16333 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.46■□□□□ 0.23
NCK1P16333 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.46■□□□□ 0.23
NCK1P16333 NEK4P2-201ENST00000580004 1012 ntBASIC16.46■□□□□ 0.23
NCK1P16333 MIR4785-201ENST00000585005 73 ntBASIC16.46■□□□□ 0.23
NCK1P16333 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.46■□□□□ 0.23
NCK1P16333 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.46■□□□□ 0.23
NCK1P16333 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NCK1P16333 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NCK1P16333 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NCK1P16333 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NCK1P16333 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NCK1P16333 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.46■□□□□ 0.23
NCK1P16333 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
NCK1P16333 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
NCK1P16333 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NCK1P16333 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
NCK1P16333 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.46■□□□□ 0.22
NCK1P16333 KRT8P9-201ENST00000558927 1449 ntBASIC16.45■□□□□ 0.22
NCK1P16333 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.45■□□□□ 0.22
NCK1P16333 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.45■□□□□ 0.22
NCK1P16333 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NCK1P16333 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NCK1P16333 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NCK1P16333 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
NCK1P16333 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NCK1P16333 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
NCK1P16333 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NCK1P16333 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NCK1P16333 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NCK1P16333 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NCK1P16333 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NCK1P16333 AC128688.1-201ENST00000487626 519 ntBASIC16.45■□□□□ 0.22
NCK1P16333 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.45■□□□□ 0.22
NCK1P16333 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.45■□□□□ 0.22
NCK1P16333 AL355075.4-201ENST00000554988 638 ntBASIC16.45■□□□□ 0.22
NCK1P16333 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.45■□□□□ 0.22
NCK1P16333 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.45■□□□□ 0.22
NCK1P16333 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NCK1P16333 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NCK1P16333 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NCK1P16333 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NCK1P16333 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NCK1P16333 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NCK1P16333 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NCK1P16333 AC006449.5-201ENST00000610658 2098 ntBASIC16.45■□□□□ 0.22
NCK1P16333 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NCK1P16333 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.45■□□□□ 0.22
NCK1P16333 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.45■□□□□ 0.22
NCK1P16333 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NCK1P16333 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
NCK1P16333 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NCK1P16333 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.45■□□□□ 0.22
NCK1P16333 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.45■□□□□ 0.22
NCK1P16333 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.45■□□□□ 0.22
NCK1P16333 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.45■□□□□ 0.22
NCK1P16333 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.45■□□□□ 0.22
NCK1P16333 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.45■□□□□ 0.22
NCK1P16333 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NCK1P16333 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
NCK1P16333 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NCK1P16333 PCDHB17P-201ENST00000539533 2393 ntBASIC16.44■□□□□ 0.22
NCK1P16333 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NCK1P16333 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NCK1P16333 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NCK1P16333 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NCK1P16333 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.44■□□□□ 0.22
NCK1P16333 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.44■□□□□ 0.22
NCK1P16333 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NCK1P16333 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.44■□□□□ 0.22
NCK1P16333 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NCK1P16333 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NCK1P16333 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.44■□□□□ 0.22
NCK1P16333 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NCK1P16333 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NCK1P16333 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NCK1P16333 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.44■□□□□ 0.22
NCK1P16333 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.44■□□□□ 0.22
NCK1P16333 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.44■□□□□ 0.22
NCK1P16333 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms