Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.13■□□□□ 0.49
TCF4P15884 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.13■□□□□ 0.49
TCF4P15884 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.13■□□□□ 0.49
TCF4P15884 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.13■□□□□ 0.49
TCF4P15884 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.13■□□□□ 0.49
TCF4P15884 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.13■□□□□ 0.49
TCF4P15884 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TCF4P15884 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TCF4P15884 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
TCF4P15884 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.13■□□□□ 0.49
TCF4P15884 AC005915.1-201ENST00000624912 2018 ntBASIC18.13■□□□□ 0.49
TCF4P15884 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.13■□□□□ 0.49
TCF4P15884 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.13■□□□□ 0.49
TCF4P15884 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TCF4P15884 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TCF4P15884 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TCF4P15884 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.12■□□□□ 0.49
TCF4P15884 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TCF4P15884 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
TCF4P15884 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TCF4P15884 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
TCF4P15884 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.12■□□□□ 0.49
TCF4P15884 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TCF4P15884 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.12■□□□□ 0.49
TCF4P15884 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TCF4P15884 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TCF4P15884 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TCF4P15884 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.12■□□□□ 0.49
TCF4P15884 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.12■□□□□ 0.49
TCF4P15884 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TCF4P15884 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TCF4P15884 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.12■□□□□ 0.49
TCF4P15884 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TCF4P15884 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.12■□□□□ 0.49
TCF4P15884 NUS1P2-201ENST00000417358 873 ntBASIC18.12■□□□□ 0.49
TCF4P15884 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.12■□□□□ 0.49
TCF4P15884 STK19B-204ENST00000512515 211 ntBASIC18.12■□□□□ 0.49
TCF4P15884 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TCF4P15884 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.12■□□□□ 0.49
TCF4P15884 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.12■□□□□ 0.49
TCF4P15884 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.12■□□□□ 0.49
TCF4P15884 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.12■□□□□ 0.49
TCF4P15884 AC138894.3-201ENST00000603787 634 ntBASIC18.12■□□□□ 0.49
TCF4P15884 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.12■□□□□ 0.49
TCF4P15884 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.12■□□□□ 0.49
TCF4P15884 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.12■□□□□ 0.49
TCF4P15884 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
TCF4P15884 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.12■□□□□ 0.49
TCF4P15884 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.12■□□□□ 0.49
TCF4P15884 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.12■□□□□ 0.49
TCF4P15884 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TCF4P15884 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.12■□□□□ 0.49
TCF4P15884 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TCF4P15884 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TCF4P15884 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.12■□□□□ 0.49
TCF4P15884 AL121761.2-201ENST00000598007 1648 ntBASIC18.12■□□□□ 0.49
TCF4P15884 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TCF4P15884 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
TCF4P15884 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TCF4P15884 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.11■□□□□ 0.49
TCF4P15884 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TCF4P15884 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCF4P15884 AGGF1P2-201ENST00000426656 2106 ntBASIC18.11■□□□□ 0.49
TCF4P15884 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCF4P15884 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.11■□□□□ 0.49
TCF4P15884 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCF4P15884 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCF4P15884 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.11■□□□□ 0.49
TCF4P15884 KLF4P1-201ENST00000412782 1185 ntBASIC18.11■□□□□ 0.49
TCF4P15884 UPK3BP1-201ENST00000428678 509 ntBASIC18.11■□□□□ 0.49
TCF4P15884 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.11■□□□□ 0.49
TCF4P15884 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TCF4P15884 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCF4P15884 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCF4P15884 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.11■□□□□ 0.49
TCF4P15884 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.11■□□□□ 0.49
TCF4P15884 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.11■□□□□ 0.49
TCF4P15884 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TCF4P15884 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCF4P15884 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCF4P15884 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TCF4P15884 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.11■□□□□ 0.49
TCF4P15884 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TCF4P15884 AC092068.3-201ENST00000587894 2016 ntBASIC18.11■□□□□ 0.49
TCF4P15884 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.11■□□□□ 0.49
TCF4P15884 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCF4P15884 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TCF4P15884 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TCF4P15884 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TCF4P15884 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.11■□□□□ 0.49
TCF4P15884 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TCF4P15884 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TCF4P15884 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TCF4P15884 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.1■□□□□ 0.49
TCF4P15884 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TCF4P15884 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.1■□□□□ 0.49
TCF4P15884 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TCF4P15884 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TCF4P15884 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TCF4P15884 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms