Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC130P13994 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC130P13994 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC130P13994 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC130P13994 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC130P13994 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC130P13994 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC130P13994 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
CCDC130P13994 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC130P13994 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CCDC130P13994 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
CCDC130P13994 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC130P13994 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC130P13994 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC130P13994 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC130P13994 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC130P13994 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC130P13994 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC130P13994 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC130P13994 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC130P13994 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC130P13994 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CCDC130P13994 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CCDC130P13994 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC130P13994 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC130P13994 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC130P13994 AP002414.3-201ENST00000589352 1468 ntBASIC18.4■□□□□ 0.54
CCDC130P13994 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC130P13994 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC130P13994 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC130P13994 AL138688.1-201ENST00000624851 1594 ntBASIC18.4■□□□□ 0.54
CCDC130P13994 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC130P13994 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC130P13994 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.4■□□□□ 0.54
CCDC130P13994 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC130P13994 LINC00982-205ENST00000420957 435 ntBASIC18.4■□□□□ 0.54
CCDC130P13994 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC130P13994 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CCDC130P13994 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC130P13994 AC139887.3-201ENST00000568585 713 ntBASIC18.4■□□□□ 0.54
CCDC130P13994 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.4■□□□□ 0.54
CCDC130P13994 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC130P13994 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.4■□□□□ 0.54
CCDC130P13994 AL589182.2-201ENST00000619332 1049 ntBASIC18.4■□□□□ 0.54
CCDC130P13994 AC008735.5-201ENST00000623544 497 ntBASIC18.4■□□□□ 0.54
CCDC130P13994 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC130P13994 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC130P13994 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC130P13994 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC130P13994 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC130P13994 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CCDC130P13994 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CCDC130P13994 NCF1C-201ENST00000438382 1427 ntBASIC18.4■□□□□ 0.54
CCDC130P13994 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC130P13994 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC130P13994 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC130P13994 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
CCDC130P13994 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC130P13994 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC130P13994 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC130P13994 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC130P13994 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC130P13994 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC130P13994 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC130P13994 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC130P13994 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC130P13994 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC130P13994 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.39■□□□□ 0.53
CCDC130P13994 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC130P13994 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC130P13994 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.39■□□□□ 0.53
CCDC130P13994 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC130P13994 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC130P13994 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC130P13994 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC130P13994 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CCDC130P13994 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC130P13994 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC130P13994 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC130P13994 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC130P13994 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC130P13994 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC130P13994 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC130P13994 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC130P13994 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC130P13994 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC130P13994 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC130P13994 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CCDC130P13994 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC130P13994 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CCDC130P13994 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
CCDC130P13994 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
CCDC130P13994 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CCDC130P13994 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC130P13994 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.38■□□□□ 0.53
CCDC130P13994 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC130P13994 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC130P13994 ELK2BP-201ENST00000415014 1224 ntBASIC18.38■□□□□ 0.53
CCDC130P13994 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC130P13994 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms