Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UBL4AP11441 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
UBL4AP11441 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBL4AP11441 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.13■□□□□ 0.17
UBL4AP11441 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.13■□□□□ 0.17
UBL4AP11441 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.13■□□□□ 0.17
UBL4AP11441 AP000867.3-201ENST00000524675 377 ntBASIC16.13■□□□□ 0.17
UBL4AP11441 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.13■□□□□ 0.17
UBL4AP11441 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.13■□□□□ 0.17
UBL4AP11441 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.13■□□□□ 0.17
UBL4AP11441 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UBL4AP11441 MIR3180-1-201ENST00000580374 94 ntBASIC16.13■□□□□ 0.17
UBL4AP11441 MIR3180-3-201ENST00000584616 94 ntBASIC16.13■□□□□ 0.17
UBL4AP11441 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.13■□□□□ 0.17
UBL4AP11441 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.13■□□□□ 0.17
UBL4AP11441 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
UBL4AP11441 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.13■□□□□ 0.17
UBL4AP11441 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBL4AP11441 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
UBL4AP11441 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBL4AP11441 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBL4AP11441 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBL4AP11441 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UBL4AP11441 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.13■□□□□ 0.17
UBL4AP11441 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.13■□□□□ 0.17
UBL4AP11441 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBL4AP11441 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBL4AP11441 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.13■□□□□ 0.17
UBL4AP11441 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UBL4AP11441 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBL4AP11441 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UBL4AP11441 AL662844.4-201ENST00000606367 2838 ntBASIC16.13■□□□□ 0.17
UBL4AP11441 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.13■□□□□ 0.17
UBL4AP11441 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.13■□□□□ 0.17
UBL4AP11441 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.12■□□□□ 0.17
UBL4AP11441 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
UBL4AP11441 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBL4AP11441 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBL4AP11441 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBL4AP11441 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBL4AP11441 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBL4AP11441 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
UBL4AP11441 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBL4AP11441 UPK3BP1-201ENST00000428678 509 ntBASIC16.12■□□□□ 0.17
UBL4AP11441 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.12■□□□□ 0.17
UBL4AP11441 AC104819.1-201ENST00000504587 486 ntBASIC16.12■□□□□ 0.17
UBL4AP11441 AC096582.2-201ENST00000510860 516 ntBASIC16.12■□□□□ 0.17
UBL4AP11441 IGHV3-52-201ENST00000519770 353 ntBASIC16.12■□□□□ 0.17
UBL4AP11441 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.12■□□□□ 0.17
UBL4AP11441 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.12■□□□□ 0.17
UBL4AP11441 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.12■□□□□ 0.17
UBL4AP11441 AC074051.2-201ENST00000565115 352 ntBASIC16.12■□□□□ 0.17
UBL4AP11441 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
UBL4AP11441 AC092329.2-201ENST00000598402 547 ntBASIC16.12■□□□□ 0.17
UBL4AP11441 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBL4AP11441 NSUN5P1-202ENST00000421140 1535 ntBASIC16.12■□□□□ 0.17
UBL4AP11441 NSUN5P2-203ENST00000457352 1529 ntBASIC16.12■□□□□ 0.17
UBL4AP11441 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
UBL4AP11441 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
UBL4AP11441 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBL4AP11441 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBL4AP11441 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
UBL4AP11441 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBL4AP11441 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
UBL4AP11441 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
UBL4AP11441 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBL4AP11441 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.11■□□□□ 0.17
UBL4AP11441 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBL4AP11441 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBL4AP11441 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.11■□□□□ 0.17
UBL4AP11441 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBL4AP11441 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBL4AP11441 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBL4AP11441 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBL4AP11441 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
UBL4AP11441 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBL4AP11441 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.11■□□□□ 0.17
UBL4AP11441 SIRPAP1-201ENST00000448467 1770 ntBASIC16.11■□□□□ 0.17
UBL4AP11441 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBL4AP11441 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
UBL4AP11441 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBL4AP11441 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBL4AP11441 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBL4AP11441 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBL4AP11441 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.11■□□□□ 0.17
UBL4AP11441 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBL4AP11441 MYCLP1-201ENST00000372451 1075 ntBASIC16.11■□□□□ 0.17
UBL4AP11441 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
UBL4AP11441 AC103564.2-201ENST00000432853 1299 ntBASIC16.11■□□□□ 0.17
UBL4AP11441 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
UBL4AP11441 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.11■□□□□ 0.17
UBL4AP11441 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.11■□□□□ 0.17
UBL4AP11441 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.11■□□□□ 0.17
UBL4AP11441 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
UBL4AP11441 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.11■□□□□ 0.17
UBL4AP11441 AC012615.1-201ENST00000565797 1299 ntBASIC16.11■□□□□ 0.17
UBL4AP11441 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.11■□□□□ 0.17
UBL4AP11441 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.11■□□□□ 0.17
UBL4AP11441 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBL4AP11441 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms