Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.79■□□□□ 0.12
FREM3P0C091 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.79■□□□□ 0.12
FREM3P0C091 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FREM3P0C091 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FREM3P0C091 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.79■□□□□ 0.12
FREM3P0C091 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FREM3P0C091 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
FREM3P0C091 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
FREM3P0C091 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.79■□□□□ 0.12
FREM3P0C091 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.79■□□□□ 0.12
FREM3P0C091 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.79■□□□□ 0.12
FREM3P0C091 AC010327.4-202ENST00000591484 748 ntBASIC15.79■□□□□ 0.12
FREM3P0C091 TERC-201ENST00000602385 541 ntBASIC15.79■□□□□ 0.12
FREM3P0C091 AC025062.2-201ENST00000605477 670 ntBASIC15.79■□□□□ 0.12
FREM3P0C091 AC116407.3-201ENST00000623905 1129 ntBASIC15.79■□□□□ 0.12
FREM3P0C091 AC006504.4-201ENST00000592118 1568 ntBASIC15.79■□□□□ 0.12
FREM3P0C091 AL138688.1-201ENST00000624851 1594 ntBASIC15.79■□□□□ 0.12
FREM3P0C091 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FREM3P0C091 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FREM3P0C091 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
FREM3P0C091 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.78■□□□□ 0.12
FREM3P0C091 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
FREM3P0C091 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.78■□□□□ 0.12
FREM3P0C091 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FREM3P0C091 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
FREM3P0C091 HLA-J-201ENST00000462773 1622 ntBASIC15.78■□□□□ 0.12
FREM3P0C091 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
FREM3P0C091 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.78■□□□□ 0.12
FREM3P0C091 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
FREM3P0C091 AC136632.2-201ENST00000512891 861 ntBASIC15.78■□□□□ 0.12
FREM3P0C091 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.78■□□□□ 0.12
FREM3P0C091 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
FREM3P0C091 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
FREM3P0C091 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FREM3P0C091 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FREM3P0C091 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
FREM3P0C091 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
FREM3P0C091 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FREM3P0C091 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
FREM3P0C091 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
FREM3P0C091 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
FREM3P0C091 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
FREM3P0C091 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
FREM3P0C091 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.77■□□□□ 0.12
FREM3P0C091 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
FREM3P0C091 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.77■□□□□ 0.12
FREM3P0C091 LAGE3P1-201ENST00000425356 484 ntBASIC15.77■□□□□ 0.12
FREM3P0C091 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
FREM3P0C091 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
FREM3P0C091 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
FREM3P0C091 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.77■□□□□ 0.12
FREM3P0C091 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
FREM3P0C091 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.77■□□□□ 0.12
FREM3P0C091 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.77■□□□□ 0.12
FREM3P0C091 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.77■□□□□ 0.12
FREM3P0C091 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
FREM3P0C091 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
FREM3P0C091 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
FREM3P0C091 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
FREM3P0C091 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.77■□□□□ 0.11
FREM3P0C091 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
FREM3P0C091 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
FREM3P0C091 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.77■□□□□ 0.11
FREM3P0C091 AC108073.2-201ENST00000464002 357 ntBASIC15.77■□□□□ 0.11
FREM3P0C091 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.77■□□□□ 0.11
FREM3P0C091 AC018845.2-201ENST00000568326 409 ntBASIC15.77■□□□□ 0.11
FREM3P0C091 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
FREM3P0C091 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
FREM3P0C091 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
FREM3P0C091 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
FREM3P0C091 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
FREM3P0C091 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.77■□□□□ 0.11
FREM3P0C091 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
FREM3P0C091 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.77■□□□□ 0.11
FREM3P0C091 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FREM3P0C091 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
FREM3P0C091 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.76■□□□□ 0.11
FREM3P0C091 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.76■□□□□ 0.11
FREM3P0C091 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.76■□□□□ 0.11
FREM3P0C091 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.76■□□□□ 0.11
FREM3P0C091 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.76■□□□□ 0.11
FREM3P0C091 IGHV3-52-201ENST00000519770 353 ntBASIC15.76■□□□□ 0.11
FREM3P0C091 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.76■□□□□ 0.11
FREM3P0C091 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FREM3P0C091 AC105339.3-201ENST00000560043 636 ntBASIC15.76■□□□□ 0.11
FREM3P0C091 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FREM3P0C091 AC027601.4-201ENST00000611259 610 ntBASIC15.76■□□□□ 0.11
FREM3P0C091 AL590787.1-201ENST00000568856 1315 ntBASIC15.76■□□□□ 0.11
FREM3P0C091 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FREM3P0C091 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FREM3P0C091 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FREM3P0C091 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
FREM3P0C091 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FREM3P0C091 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FREM3P0C091 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
FREM3P0C091 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
FREM3P0C091 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
FREM3P0C091 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
FREM3P0C091 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
FREM3P0C091 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms