Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.75■□□□□ 0.43
MT-ND3P03897 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.75■□□□□ 0.43
MT-ND3P03897 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-ND3P03897 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-ND3P03897 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-ND3P03897 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MT-ND3P03897 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-ND3P03897 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-ND3P03897 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MT-ND3P03897 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-ND3P03897 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MT-ND3P03897 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
MT-ND3P03897 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MT-ND3P03897 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-ND3P03897 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-ND3P03897 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MT-ND3P03897 UBALD1-205ENST00000590891 2641 ntBASIC17.74■□□□□ 0.43
MT-ND3P03897 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MT-ND3P03897 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MT-ND3P03897 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
MT-ND3P03897 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MT-ND3P03897 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
MT-ND3P03897 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
MT-ND3P03897 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MT-ND3P03897 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
MT-ND3P03897 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.74■□□□□ 0.43
MT-ND3P03897 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MT-ND3P03897 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
MT-ND3P03897 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MT-ND3P03897 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.74■□□□□ 0.43
MT-ND3P03897 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MT-ND3P03897 AL645929.1-201ENST00000420084 975 ntBASIC17.74■□□□□ 0.43
MT-ND3P03897 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
MT-ND3P03897 AC113404.2-201ENST00000507884 177 ntBASIC17.74■□□□□ 0.43
MT-ND3P03897 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
MT-ND3P03897 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MT-ND3P03897 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
MT-ND3P03897 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
MT-ND3P03897 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
MT-ND3P03897 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.74■□□□□ 0.43
MT-ND3P03897 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MT-ND3P03897 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MT-ND3P03897 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
MT-ND3P03897 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
MT-ND3P03897 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
MT-ND3P03897 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MT-ND3P03897 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MT-ND3P03897 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.73■□□□□ 0.43
MT-ND3P03897 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MT-ND3P03897 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MT-ND3P03897 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MT-ND3P03897 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.73■□□□□ 0.43
MT-ND3P03897 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MT-ND3P03897 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
MT-ND3P03897 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
MT-ND3P03897 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
MT-ND3P03897 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MT-ND3P03897 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MT-ND3P03897 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.73■□□□□ 0.43
MT-ND3P03897 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.73■□□□□ 0.43
MT-ND3P03897 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MT-ND3P03897 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
MT-ND3P03897 AGGF1P2-201ENST00000426656 2106 ntBASIC17.73■□□□□ 0.43
MT-ND3P03897 KRT18P65-201ENST00000439811 1286 ntBASIC17.73■□□□□ 0.43
MT-ND3P03897 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
MT-ND3P03897 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
MT-ND3P03897 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.73■□□□□ 0.43
MT-ND3P03897 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.73■□□□□ 0.43
MT-ND3P03897 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
MT-ND3P03897 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.73■□□□□ 0.43
MT-ND3P03897 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MT-ND3P03897 KRT8P47-201ENST00000604727 1398 ntBASIC17.73■□□□□ 0.43
MT-ND3P03897 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
MT-ND3P03897 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MT-ND3P03897 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
MT-ND3P03897 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MT-ND3P03897 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.73■□□□□ 0.43
MT-ND3P03897 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MT-ND3P03897 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.73■□□□□ 0.43
MT-ND3P03897 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
MT-ND3P03897 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND3P03897 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND3P03897 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND3P03897 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
MT-ND3P03897 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND3P03897 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND3P03897 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND3P03897 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND3P03897 AC060834.1-201ENST00000443027 2032 ntBASIC17.72■□□□□ 0.43
MT-ND3P03897 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.72■□□□□ 0.43
MT-ND3P03897 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND3P03897 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
MT-ND3P03897 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND3P03897 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.72■□□□□ 0.43
MT-ND3P03897 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND3P03897 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND3P03897 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND3P03897 ATP5G2P1-201ENST00000433580 426 ntBASIC17.72■□□□□ 0.43
MT-ND3P03897 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.72■□□□□ 0.43
MT-ND3P03897 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms