Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.21■□□□□ 0.51
TRUB2O95900 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRUB2O95900 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRUB2O95900 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TRUB2O95900 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRUB2O95900 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.21■□□□□ 0.51
TRUB2O95900 AC148477.5-201ENST00000625164 1645 ntBASIC18.21■□□□□ 0.51
TRUB2O95900 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRUB2O95900 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.21■□□□□ 0.51
TRUB2O95900 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRUB2O95900 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
TRUB2O95900 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRUB2O95900 AL020989.1-201ENST00000422979 469 ntBASIC18.21■□□□□ 0.51
TRUB2O95900 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TRUB2O95900 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRUB2O95900 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRUB2O95900 SART3-203ENST00000546611 1184 ntBASIC18.21■□□□□ 0.51
TRUB2O95900 NKAPP1-205ENST00000585790 367 ntBASIC18.21■□□□□ 0.51
TRUB2O95900 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.21■□□□□ 0.51
TRUB2O95900 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRUB2O95900 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TRUB2O95900 AL139288.1-201ENST00000623748 933 ntBASIC18.21■□□□□ 0.51
TRUB2O95900 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TRUB2O95900 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TRUB2O95900 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRUB2O95900 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRUB2O95900 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRUB2O95900 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRUB2O95900 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRUB2O95900 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.2■□□□□ 0.5
TRUB2O95900 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRUB2O95900 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRUB2O95900 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRUB2O95900 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TRUB2O95900 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.2■□□□□ 0.5
TRUB2O95900 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.2■□□□□ 0.5
TRUB2O95900 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TRUB2O95900 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRUB2O95900 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRUB2O95900 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.2■□□□□ 0.5
TRUB2O95900 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
TRUB2O95900 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TRUB2O95900 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRUB2O95900 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.2■□□□□ 0.5
TRUB2O95900 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.2■□□□□ 0.5
TRUB2O95900 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
TRUB2O95900 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.2■□□□□ 0.5
TRUB2O95900 SCARNA2-201ENST00000458748 420 ntBASIC18.2■□□□□ 0.5
TRUB2O95900 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.2■□□□□ 0.5
TRUB2O95900 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRUB2O95900 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.2■□□□□ 0.5
TRUB2O95900 AC104692.2-201ENST00000603054 253 ntBASIC18.2■□□□□ 0.5
TRUB2O95900 TP73-AS1-207ENST00000624167 988 ntBASIC18.2■□□□□ 0.5
TRUB2O95900 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRUB2O95900 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRUB2O95900 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.2■□□□□ 0.5
TRUB2O95900 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRUB2O95900 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRUB2O95900 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRUB2O95900 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRUB2O95900 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRUB2O95900 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRUB2O95900 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRUB2O95900 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRUB2O95900 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
TRUB2O95900 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRUB2O95900 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TRUB2O95900 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.19■□□□□ 0.5
TRUB2O95900 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRUB2O95900 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TRUB2O95900 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
TRUB2O95900 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TRUB2O95900 AC046185.3-201ENST00000623228 1824 ntBASIC18.19■□□□□ 0.5
TRUB2O95900 AC004817.3-201ENST00000602957 2129 ntBASIC18.19■□□□□ 0.5
TRUB2O95900 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRUB2O95900 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TRUB2O95900 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRUB2O95900 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRUB2O95900 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRUB2O95900 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRUB2O95900 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRUB2O95900 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRUB2O95900 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRUB2O95900 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRUB2O95900 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.19■□□□□ 0.5
TRUB2O95900 BX005266.1-201ENST00000473402 457 ntBASIC18.19■□□□□ 0.5
TRUB2O95900 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
TRUB2O95900 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.19■□□□□ 0.5
TRUB2O95900 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TRUB2O95900 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.19■□□□□ 0.5
TRUB2O95900 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.19■□□□□ 0.5
TRUB2O95900 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.19■□□□□ 0.5
TRUB2O95900 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRUB2O95900 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRUB2O95900 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRUB2O95900 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRUB2O95900 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRUB2O95900 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRUB2O95900 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TRUB2O95900 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms