Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CNOT4O95628 KRT18P67-201ENST00000432816 1264 ntBASIC15.49■□□□□ 0.07
CNOT4O95628 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.49■□□□□ 0.07
CNOT4O95628 AC073648.2-201ENST00000510116 352 ntBASIC15.49■□□□□ 0.07
CNOT4O95628 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.49■□□□□ 0.07
CNOT4O95628 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.49■□□□□ 0.07
CNOT4O95628 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.49■□□□□ 0.07
CNOT4O95628 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.49■□□□□ 0.07
CNOT4O95628 AC019129.2-201ENST00000609837 1235 ntBASIC15.49■□□□□ 0.07
CNOT4O95628 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.49■□□□□ 0.07
CNOT4O95628 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.49■□□□□ 0.07
CNOT4O95628 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.49■□□□□ 0.07
CNOT4O95628 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.49■□□□□ 0.07
CNOT4O95628 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.49■□□□□ 0.07
CNOT4O95628 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CNOT4O95628 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CNOT4O95628 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CNOT4O95628 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CNOT4O95628 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CNOT4O95628 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CNOT4O95628 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CNOT4O95628 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CNOT4O95628 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CNOT4O95628 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.48■□□□□ 0.07
CNOT4O95628 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CNOT4O95628 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.48■□□□□ 0.07
CNOT4O95628 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.48■□□□□ 0.07
CNOT4O95628 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CNOT4O95628 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.48■□□□□ 0.07
CNOT4O95628 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CNOT4O95628 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CNOT4O95628 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CNOT4O95628 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CNOT4O95628 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
CNOT4O95628 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.48■□□□□ 0.07
CNOT4O95628 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CNOT4O95628 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CNOT4O95628 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CNOT4O95628 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CNOT4O95628 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CNOT4O95628 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CNOT4O95628 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CNOT4O95628 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.48■□□□□ 0.07
CNOT4O95628 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CNOT4O95628 SPDYE21P-201ENST00000413323 827 ntBASIC15.48■□□□□ 0.07
CNOT4O95628 AL020989.1-201ENST00000422979 469 ntBASIC15.48■□□□□ 0.07
CNOT4O95628 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.48■□□□□ 0.07
CNOT4O95628 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CNOT4O95628 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.48■□□□□ 0.07
CNOT4O95628 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.48■□□□□ 0.07
CNOT4O95628 FAM197Y8-203ENST00000450145 560 ntBASIC15.48■□□□□ 0.07
CNOT4O95628 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CNOT4O95628 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.48■□□□□ 0.07
CNOT4O95628 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.48■□□□□ 0.07
CNOT4O95628 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.48■□□□□ 0.07
CNOT4O95628 AL773604.1-201ENST00000617417 272 ntBASIC15.48■□□□□ 0.07
CNOT4O95628 AC073592.5-201ENST00000624854 528 ntBASIC15.48■□□□□ 0.07
CNOT4O95628 AC020916.1-201ENST00000587762 1774 ntBASIC15.48■□□□□ 0.07
CNOT4O95628 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
CNOT4O95628 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.48■□□□□ 0.07
CNOT4O95628 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.48■□□□□ 0.07
CNOT4O95628 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CNOT4O95628 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CNOT4O95628 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CNOT4O95628 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CNOT4O95628 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CNOT4O95628 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
CNOT4O95628 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.48■□□□□ 0.07
CNOT4O95628 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.48■□□□□ 0.07
CNOT4O95628 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.48■□□□□ 0.07
CNOT4O95628 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT4O95628 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT4O95628 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
CNOT4O95628 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.47■□□□□ 0.07
CNOT4O95628 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
CNOT4O95628 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.47■□□□□ 0.07
CNOT4O95628 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT4O95628 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
CNOT4O95628 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT4O95628 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT4O95628 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.47■□□□□ 0.07
CNOT4O95628 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT4O95628 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CNOT4O95628 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT4O95628 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.47■□□□□ 0.07
CNOT4O95628 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT4O95628 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT4O95628 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
CNOT4O95628 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.47■□□□□ 0.07
CNOT4O95628 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.47■□□□□ 0.07
CNOT4O95628 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CNOT4O95628 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.47■□□□□ 0.07
CNOT4O95628 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT4O95628 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CNOT4O95628 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.47■□□□□ 0.07
CNOT4O95628 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CNOT4O95628 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT4O95628 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.47■□□□□ 0.07
CNOT4O95628 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT4O95628 AC068880.1-201ENST00000507289 2297 ntBASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms