Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.85■□□□□ 0.77
ATP2A1O14983 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP2A1O14983 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP2A1O14983 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP2A1O14983 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP2A1O14983 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP2A1O14983 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.85■□□□□ 0.77
ATP2A1O14983 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP2A1O14983 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP2A1O14983 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP2A1O14983 ELL2P1-201ENST00000413990 1906 ntBASIC19.85■□□□□ 0.77
ATP2A1O14983 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.85■□□□□ 0.77
ATP2A1O14983 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ATP2A1O14983 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.85■□□□□ 0.77
ATP2A1O14983 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP2A1O14983 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.85■□□□□ 0.77
ATP2A1O14983 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.85■□□□□ 0.77
ATP2A1O14983 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.85■□□□□ 0.77
ATP2A1O14983 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.85■□□□□ 0.77
ATP2A1O14983 AC007064.4-201ENST00000637740 555 ntBASIC19.85■□□□□ 0.77
ATP2A1O14983 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ATP2A1O14983 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
ATP2A1O14983 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
ATP2A1O14983 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.85■□□□□ 0.77
ATP2A1O14983 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP2A1O14983 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP2A1O14983 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.85■□□□□ 0.77
ATP2A1O14983 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATP2A1O14983 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.84■□□□□ 0.77
ATP2A1O14983 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
ATP2A1O14983 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATP2A1O14983 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATP2A1O14983 BCAR1-209ENST00000546196 1340 ntBASIC19.84■□□□□ 0.77
ATP2A1O14983 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATP2A1O14983 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATP2A1O14983 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.84■□□□□ 0.77
ATP2A1O14983 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.84■□□□□ 0.77
ATP2A1O14983 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATP2A1O14983 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATP2A1O14983 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATP2A1O14983 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.84■□□□□ 0.77
ATP2A1O14983 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.84■□□□□ 0.77
ATP2A1O14983 CXCL1P1-201ENST00000502804 216 ntBASIC19.84■□□□□ 0.77
ATP2A1O14983 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.84■□□□□ 0.77
ATP2A1O14983 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.84■□□□□ 0.77
ATP2A1O14983 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.84■□□□□ 0.77
ATP2A1O14983 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.84■□□□□ 0.77
ATP2A1O14983 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.84■□□□□ 0.77
ATP2A1O14983 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.84■□□□□ 0.77
ATP2A1O14983 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.84■□□□□ 0.77
ATP2A1O14983 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
ATP2A1O14983 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATP2A1O14983 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATP2A1O14983 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.84■□□□□ 0.77
ATP2A1O14983 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.84■□□□□ 0.77
ATP2A1O14983 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATP2A1O14983 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATP2A1O14983 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATP2A1O14983 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATP2A1O14983 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.83■□□□□ 0.77
ATP2A1O14983 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATP2A1O14983 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATP2A1O14983 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATP2A1O14983 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ATP2A1O14983 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATP2A1O14983 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATP2A1O14983 FAM185BP-201ENST00000443595 716 ntBASIC19.83■□□□□ 0.77
ATP2A1O14983 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
ATP2A1O14983 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.83■□□□□ 0.77
ATP2A1O14983 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.83■□□□□ 0.77
ATP2A1O14983 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATP2A1O14983 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.83■□□□□ 0.77
ATP2A1O14983 AC023141.13-201ENST00000604991 943 ntBASIC19.83■□□□□ 0.77
ATP2A1O14983 AC025580.3-201ENST00000617932 1424 ntBASIC19.83■□□□□ 0.76
ATP2A1O14983 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.83■□□□□ 0.76
ATP2A1O14983 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
ATP2A1O14983 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
ATP2A1O14983 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ATP2A1O14983 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP2A1O14983 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP2A1O14983 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP2A1O14983 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP2A1O14983 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP2A1O14983 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.82■□□□□ 0.76
ATP2A1O14983 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.82■□□□□ 0.76
ATP2A1O14983 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP2A1O14983 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
ATP2A1O14983 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.82■□□□□ 0.76
ATP2A1O14983 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP2A1O14983 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ATP2A1O14983 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.82■□□□□ 0.76
ATP2A1O14983 SLC25A6P5-201ENST00000435663 894 ntBASIC19.82■□□□□ 0.76
ATP2A1O14983 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.82■□□□□ 0.76
ATP2A1O14983 AC074386.1-202ENST00000463561 864 ntBASIC19.82■□□□□ 0.76
ATP2A1O14983 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.82■□□□□ 0.76
ATP2A1O14983 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP2A1O14983 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.82■□□□□ 0.76
ATP2A1O14983 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.82■□□□□ 0.76
ATP2A1O14983 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.82■□□□□ 0.76
ATP2A1O14983 OR6D1P-202ENST00000641007 5290 ntBASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms