Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.55■□□□□ 0.24
CASQ2O14958 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CASQ2O14958 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CASQ2O14958 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.55■□□□□ 0.24
CASQ2O14958 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CASQ2O14958 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.55■□□□□ 0.24
CASQ2O14958 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.55■□□□□ 0.24
CASQ2O14958 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.55■□□□□ 0.24
CASQ2O14958 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CASQ2O14958 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CASQ2O14958 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CASQ2O14958 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CASQ2O14958 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CASQ2O14958 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.55■□□□□ 0.24
CASQ2O14958 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CASQ2O14958 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CASQ2O14958 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CASQ2O14958 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.55■□□□□ 0.24
CASQ2O14958 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.54■□□□□ 0.24
CASQ2O14958 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CASQ2O14958 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CASQ2O14958 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.54■□□□□ 0.24
CASQ2O14958 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CASQ2O14958 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CASQ2O14958 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CASQ2O14958 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CASQ2O14958 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.54■□□□□ 0.24
CASQ2O14958 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CASQ2O14958 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
CASQ2O14958 AL662844.4-201ENST00000606367 2838 ntBASIC16.54■□□□□ 0.24
CASQ2O14958 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CASQ2O14958 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CASQ2O14958 AC004911.1-201ENST00000416316 871 ntBASIC16.54■□□□□ 0.24
CASQ2O14958 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.54■□□□□ 0.24
CASQ2O14958 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.54■□□□□ 0.24
CASQ2O14958 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC16.54■□□□□ 0.24
CASQ2O14958 MIR3180-5-201ENST00000583743 153 ntBASIC16.54■□□□□ 0.24
CASQ2O14958 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CASQ2O14958 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CASQ2O14958 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CASQ2O14958 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.54■□□□□ 0.24
CASQ2O14958 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.54■□□□□ 0.24
CASQ2O14958 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CASQ2O14958 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CASQ2O14958 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CASQ2O14958 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CASQ2O14958 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CASQ2O14958 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CASQ2O14958 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.54■□□□□ 0.24
CASQ2O14958 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.54■□□□□ 0.24
CASQ2O14958 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CASQ2O14958 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CASQ2O14958 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.53■□□□□ 0.24
CASQ2O14958 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.53■□□□□ 0.24
CASQ2O14958 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CASQ2O14958 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CASQ2O14958 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CASQ2O14958 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
CASQ2O14958 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CASQ2O14958 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CASQ2O14958 AC092053.1-201ENST00000605787 1936 ntBASIC16.53■□□□□ 0.24
CASQ2O14958 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.53■□□□□ 0.24
CASQ2O14958 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
CASQ2O14958 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CASQ2O14958 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CASQ2O14958 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CASQ2O14958 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CASQ2O14958 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.53■□□□□ 0.24
CASQ2O14958 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.53■□□□□ 0.24
CASQ2O14958 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CASQ2O14958 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CASQ2O14958 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CASQ2O14958 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CASQ2O14958 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CASQ2O14958 SLC25A1P3-201ENST00000395415 828 ntBASIC16.53■□□□□ 0.24
CASQ2O14958 ZNRF2P3-201ENST00000424200 374 ntBASIC16.53■□□□□ 0.24
CASQ2O14958 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.53■□□□□ 0.24
CASQ2O14958 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.53■□□□□ 0.24
CASQ2O14958 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.53■□□□□ 0.24
CASQ2O14958 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC16.53■□□□□ 0.24
CASQ2O14958 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CASQ2O14958 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.53■□□□□ 0.24
CASQ2O14958 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CASQ2O14958 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CASQ2O14958 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CASQ2O14958 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CASQ2O14958 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CASQ2O14958 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CASQ2O14958 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CASQ2O14958 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.53■□□□□ 0.24
CASQ2O14958 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CASQ2O14958 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CASQ2O14958 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CASQ2O14958 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CASQ2O14958 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CASQ2O14958 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.53■□□□□ 0.24
CASQ2O14958 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CASQ2O14958 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CASQ2O14958 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CASQ2O14958 LINC01311-201ENST00000565162 1445 ntBASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms