Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
UPK2O00526 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
UPK2O00526 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
UPK2O00526 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
UPK2O00526 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
UPK2O00526 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
UPK2O00526 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UPK2O00526 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
UPK2O00526 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC13.96□□□□□ -0.17
UPK2O00526 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
UPK2O00526 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
UPK2O00526 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
UPK2O00526 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
UPK2O00526 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC13.96□□□□□ -0.17
UPK2O00526 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
UPK2O00526 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC13.96□□□□□ -0.17
UPK2O00526 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC13.96□□□□□ -0.17
UPK2O00526 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
UPK2O00526 AC005336.2-201ENST00000593183 939 ntBASIC13.96□□□□□ -0.17
UPK2O00526 NDUFV2-AS1-203ENST00000608008 779 ntBASIC13.96□□□□□ -0.17
UPK2O00526 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UPK2O00526 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UPK2O00526 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UPK2O00526 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC13.96□□□□□ -0.17
UPK2O00526 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
UPK2O00526 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
UPK2O00526 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
UPK2O00526 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
UPK2O00526 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC13.96□□□□□ -0.18
UPK2O00526 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC13.96□□□□□ -0.18
UPK2O00526 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
UPK2O00526 AL049757.1-201ENST00000616842 1596 ntBASIC13.96□□□□□ -0.18
UPK2O00526 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC13.96□□□□□ -0.18
UPK2O00526 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
UPK2O00526 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC13.96□□□□□ -0.18
UPK2O00526 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
UPK2O00526 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC13.96□□□□□ -0.18
UPK2O00526 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
UPK2O00526 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.95□□□□□ -0.18
UPK2O00526 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK2O00526 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UPK2O00526 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK2O00526 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK2O00526 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK2O00526 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC13.95□□□□□ -0.18
UPK2O00526 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK2O00526 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK2O00526 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
UPK2O00526 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC13.95□□□□□ -0.18
UPK2O00526 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK2O00526 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK2O00526 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK2O00526 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK2O00526 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UPK2O00526 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC13.95□□□□□ -0.18
UPK2O00526 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC13.95□□□□□ -0.18
UPK2O00526 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UPK2O00526 AL845331.1-201ENST00000424978 1190 ntBASIC13.95□□□□□ -0.18
UPK2O00526 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC13.95□□□□□ -0.18
UPK2O00526 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UPK2O00526 KRT8P26-201ENST00000534154 1276 ntBASIC13.95□□□□□ -0.18
UPK2O00526 AL136038.3-201ENST00000561909 1096 ntBASIC13.95□□□□□ -0.18
UPK2O00526 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC13.95□□□□□ -0.18
UPK2O00526 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC13.95□□□□□ -0.18
UPK2O00526 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UPK2O00526 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK2O00526 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK2O00526 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.95□□□□□ -0.18
UPK2O00526 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK2O00526 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC13.95□□□□□ -0.18
UPK2O00526 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UPK2O00526 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK2O00526 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK2O00526 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK2O00526 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK2O00526 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC13.95□□□□□ -0.18
UPK2O00526 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK2O00526 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UPK2O00526 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC13.95□□□□□ -0.18
UPK2O00526 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC13.95□□□□□ -0.18
UPK2O00526 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK2O00526 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UPK2O00526 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
UPK2O00526 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC13.94□□□□□ -0.18
UPK2O00526 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UPK2O00526 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UPK2O00526 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC13.94□□□□□ -0.18
UPK2O00526 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK2O00526 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC13.94□□□□□ -0.18
UPK2O00526 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC13.94□□□□□ -0.18
UPK2O00526 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK2O00526 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK2O00526 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UPK2O00526 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK2O00526 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC13.94□□□□□ -0.18
UPK2O00526 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK2O00526 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK2O00526 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC13.94□□□□□ -0.18
UPK2O00526 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK2O00526 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms