Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 MXRA5Y-201ENST00000420610 8000 ntBASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 SLC47A1P1-202ENST00000449666 945 ntBASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 SLC7A1-201ENST00000380752 7347 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
CHKB-CPT1BH3BT56 CACNA1F-201ENST00000323022 6037 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
CHKB-CPT1BH3BT56 GCC2-201ENST00000309863 7537 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
CHKB-CPT1BH3BT56 GEMIN5-201ENST00000285873 5397 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
CHKB-CPT1BH3BT56 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
CHKB-CPT1BH3BT56 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
CHKB-CPT1BH3BT56 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
CHKB-CPT1BH3BT56 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
CHKB-CPT1BH3BT56 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
CHKB-CPT1BH3BT56 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
CHKB-CPT1BH3BT56 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC9.65□□□□□ -0.87
CHKB-CPT1BH3BT56 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
CHKB-CPT1BH3BT56 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
CHKB-CPT1BH3BT56 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.87
CHKB-CPT1BH3BT56 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
CHKB-CPT1BH3BT56 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC9.65□□□□□ -0.87
CHKB-CPT1BH3BT56 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC9.65□□□□□ -0.87
CHKB-CPT1BH3BT56 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 OS9-205ENST00000413095 1660 ntTSL 2 BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 HES6-206ENST00000409574 738 ntTSL 2 BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 AC105265.2-201ENST00000467189 838 ntBASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 CDV3P1-201ENST00000471403 739 ntBASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 AC103724.3-201ENST00000564481 992 ntBASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 ERI1-209ENST00000523898 5036 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 AGGF1P2-201ENST00000426656 2106 ntBASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 ABL2-204ENST00000502732 12144 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC9.64□□□□□ -0.87
CHKB-CPT1BH3BT56 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC9.63□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms