Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SHISA3A0PJX4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHISA3A0PJX4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SHISA3A0PJX4 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHISA3A0PJX4 KRT89P-201ENST00000620027 1478 ntBASIC15.16■□□□□ 0.02
SHISA3A0PJX4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHISA3A0PJX4 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.16■□□□□ 0.02
SHISA3A0PJX4 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHISA3A0PJX4 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.16■□□□□ 0.02
SHISA3A0PJX4 ALOX12P2-203ENST00000570921 1945 ntBASIC15.16■□□□□ 0.02
SHISA3A0PJX4 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SHISA3A0PJX4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
SHISA3A0PJX4 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
SHISA3A0PJX4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHISA3A0PJX4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SHISA3A0PJX4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.16■□□□□ 0.02
SHISA3A0PJX4 AC002558.1-201ENST00000488906 803 ntBASIC15.16■□□□□ 0.02
SHISA3A0PJX4 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.16■□□□□ 0.02
SHISA3A0PJX4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.16■□□□□ 0.02
SHISA3A0PJX4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.16■□□□□ 0.02
SHISA3A0PJX4 AC009154.2-201ENST00000621177 724 ntBASIC15.16■□□□□ 0.02
SHISA3A0PJX4 AL049637.2-201ENST00000641778 930 ntBASIC15.16■□□□□ 0.02
SHISA3A0PJX4 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SHISA3A0PJX4 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.16■□□□□ 0.02
SHISA3A0PJX4 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SHISA3A0PJX4 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHISA3A0PJX4 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.16■□□□□ 0.02
SHISA3A0PJX4 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHISA3A0PJX4 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHISA3A0PJX4 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.16■□□□□ 0.02
SHISA3A0PJX4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SHISA3A0PJX4 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHISA3A0PJX4 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.16■□□□□ 0.02
SHISA3A0PJX4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SHISA3A0PJX4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SHISA3A0PJX4 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SHISA3A0PJX4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHISA3A0PJX4 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 AP003071.4-201ENST00000562276 1284 ntBASIC15.15■□□□□ 0.02
SHISA3A0PJX4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 AC233702.5-201ENST00000584107 538 ntBASIC15.15■□□□□ 0.02
SHISA3A0PJX4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 AC024563.2-201ENST00000603282 481 ntBASIC15.15■□□□□ 0.02
SHISA3A0PJX4 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 AC004263.2-201ENST00000617183 678 ntBASIC15.15■□□□□ 0.02
SHISA3A0PJX4 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHISA3A0PJX4 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SHISA3A0PJX4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SHISA3A0PJX4 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHISA3A0PJX4 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHISA3A0PJX4 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHISA3A0PJX4 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SHISA3A0PJX4 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHISA3A0PJX4 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHISA3A0PJX4 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHISA3A0PJX4 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHISA3A0PJX4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHISA3A0PJX4 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SHISA3A0PJX4 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.14■□□□□ 0.01
SHISA3A0PJX4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms