Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14.02□□□□□ -0.17
TCRBV4S1A1TA0A5B7 AC079776.4-201ENST00000511039 504 ntBASIC14.02□□□□□ -0.17
TCRBV4S1A1TA0A5B7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.02□□□□□ -0.17
TCRBV4S1A1TA0A5B7 AL662844.1-201ENST00000546340 181 ntBASIC14.02□□□□□ -0.17
TCRBV4S1A1TA0A5B7 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.02□□□□□ -0.17
TCRBV4S1A1TA0A5B7 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.02□□□□□ -0.17
TCRBV4S1A1TA0A5B7 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.02□□□□□ -0.17
TCRBV4S1A1TA0A5B7 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TCRBV4S1A1TA0A5B7 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
TCRBV4S1A1TA0A5B7 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TCRBV4S1A1TA0A5B7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TCRBV4S1A1TA0A5B7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TCRBV4S1A1TA0A5B7 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
TCRBV4S1A1TA0A5B7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 HLA-J-201ENST00000462773 1622 ntBASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 AC106820.2-201ENST00000563775 3264 ntBASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 BNIP3P18-201ENST00000593976 575 ntBASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 AC114341.1-201ENST00000618070 349 ntBASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 LINC00304-203ENST00000565008 1864 ntBASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 AL121761.2-201ENST00000598007 1648 ntBASIC14.01□□□□□ -0.17
TCRBV4S1A1TA0A5B7 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 CROCCP2-202ENST00000412962 2773 ntBASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms