Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA11Q9Y5H2 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA11Q9Y5H2 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA11Q9Y5H2 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA11Q9Y5H2 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA11Q9Y5H2 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA11Q9Y5H2 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA11Q9Y5H2 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA11Q9Y5H2 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA11Q9Y5H2 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHGA11Q9Y5H2 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHGA11Q9Y5H2 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PCDHGA11Q9Y5H2 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
PCDHGA11Q9Y5H2 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA11Q9Y5H2 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA11Q9Y5H2 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGA11Q9Y5H2 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHGA11Q9Y5H2 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.91■□□□□ 0.3
PCDHGA11Q9Y5H2 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
PCDHGA11Q9Y5H2 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA11Q9Y5H2 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGA11Q9Y5H2 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA11Q9Y5H2 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGA11Q9Y5H2 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGA11Q9Y5H2 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.91■□□□□ 0.3
PCDHGA11Q9Y5H2 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.91■□□□□ 0.3
PCDHGA11Q9Y5H2 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.91■□□□□ 0.3
PCDHGA11Q9Y5H2 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHGA11Q9Y5H2 AP000550.4-202ENST00000639755 178 ntBASIC16.91■□□□□ 0.3
PCDHGA11Q9Y5H2 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA11Q9Y5H2 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA11Q9Y5H2 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA11Q9Y5H2 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA11Q9Y5H2 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHGA11Q9Y5H2 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHGA11Q9Y5H2 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA11Q9Y5H2 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA11Q9Y5H2 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA11Q9Y5H2 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA11Q9Y5H2 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGA11Q9Y5H2 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA11Q9Y5H2 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA11Q9Y5H2 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA11Q9Y5H2 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.9■□□□□ 0.3
PCDHGA11Q9Y5H2 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA11Q9Y5H2 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGA11Q9Y5H2 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA11Q9Y5H2 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA11Q9Y5H2 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA11Q9Y5H2 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA11Q9Y5H2 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
PCDHGA11Q9Y5H2 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGA11Q9Y5H2 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA11Q9Y5H2 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA11Q9Y5H2 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA11Q9Y5H2 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PCDHGA11Q9Y5H2 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
PCDHGA11Q9Y5H2 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA11Q9Y5H2 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHGA11Q9Y5H2 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.9■□□□□ 0.3
PCDHGA11Q9Y5H2 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.9■□□□□ 0.3
PCDHGA11Q9Y5H2 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA11Q9Y5H2 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHGA11Q9Y5H2 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA11Q9Y5H2 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.9■□□□□ 0.3
PCDHGA11Q9Y5H2 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGA11Q9Y5H2 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA11Q9Y5H2 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA11Q9Y5H2 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHGA11Q9Y5H2 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA11Q9Y5H2 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA11Q9Y5H2 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.9■□□□□ 0.3
PCDHGA11Q9Y5H2 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHGA11Q9Y5H2 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA11Q9Y5H2 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA11Q9Y5H2 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA11Q9Y5H2 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
PCDHGA11Q9Y5H2 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
PCDHGA11Q9Y5H2 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
PCDHGA11Q9Y5H2 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
PCDHGA11Q9Y5H2 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
PCDHGA11Q9Y5H2 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA11Q9Y5H2 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA11Q9Y5H2 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA11Q9Y5H2 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
PCDHGA11Q9Y5H2 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA11Q9Y5H2 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA11Q9Y5H2 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGA11Q9Y5H2 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA11Q9Y5H2 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA11Q9Y5H2 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA11Q9Y5H2 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA11Q9Y5H2 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA11Q9Y5H2 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA11Q9Y5H2 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.89■□□□□ 0.29
PCDHGA11Q9Y5H2 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.89■□□□□ 0.29
PCDHGA11Q9Y5H2 DRAXINP1-201ENST00000437611 948 ntBASIC16.89■□□□□ 0.29
PCDHGA11Q9Y5H2 AC111152.3-201ENST00000569699 673 ntBASIC16.89■□□□□ 0.29
PCDHGA11Q9Y5H2 Z69720.1-201ENST00000601483 472 ntBASIC16.89■□□□□ 0.29
PCDHGA11Q9Y5H2 AC019129.2-201ENST00000609837 1235 ntBASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms