Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB13Q9Y5F0 AC132938.5-201ENST00000624980 1813 ntBASIC19.27■□□□□ 0.68
PCDHB13Q9Y5F0 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
PCDHB13Q9Y5F0 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
PCDHB13Q9Y5F0 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.27■□□□□ 0.67
PCDHB13Q9Y5F0 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.27■□□□□ 0.67
PCDHB13Q9Y5F0 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHB13Q9Y5F0 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
PCDHB13Q9Y5F0 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB13Q9Y5F0 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB13Q9Y5F0 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB13Q9Y5F0 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB13Q9Y5F0 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB13Q9Y5F0 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB13Q9Y5F0 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB13Q9Y5F0 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB13Q9Y5F0 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB13Q9Y5F0 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDHB13Q9Y5F0 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHB13Q9Y5F0 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB13Q9Y5F0 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHB13Q9Y5F0 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHB13Q9Y5F0 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC19.26■□□□□ 0.67
PCDHB13Q9Y5F0 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB13Q9Y5F0 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHB13Q9Y5F0 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDHB13Q9Y5F0 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDHB13Q9Y5F0 LINC01711-201ENST00000598340 967 ntBASIC19.26■□□□□ 0.67
PCDHB13Q9Y5F0 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB13Q9Y5F0 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB13Q9Y5F0 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB13Q9Y5F0 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB13Q9Y5F0 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB13Q9Y5F0 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
PCDHB13Q9Y5F0 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB13Q9Y5F0 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB13Q9Y5F0 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB13Q9Y5F0 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHB13Q9Y5F0 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB13Q9Y5F0 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHB13Q9Y5F0 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHB13Q9Y5F0 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHB13Q9Y5F0 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHB13Q9Y5F0 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB13Q9Y5F0 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB13Q9Y5F0 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PCDHB13Q9Y5F0 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB13Q9Y5F0 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PCDHB13Q9Y5F0 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB13Q9Y5F0 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB13Q9Y5F0 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB13Q9Y5F0 CROCCP2-202ENST00000412962 2773 ntBASIC19.25■□□□□ 0.67
PCDHB13Q9Y5F0 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB13Q9Y5F0 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PCDHB13Q9Y5F0 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB13Q9Y5F0 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB13Q9Y5F0 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHB13Q9Y5F0 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB13Q9Y5F0 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHB13Q9Y5F0 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHB13Q9Y5F0 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHB13Q9Y5F0 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.25■□□□□ 0.67
PCDHB13Q9Y5F0 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHB13Q9Y5F0 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHB13Q9Y5F0 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB13Q9Y5F0 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PCDHB13Q9Y5F0 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHB13Q9Y5F0 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB13Q9Y5F0 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHB13Q9Y5F0 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB13Q9Y5F0 AC046185.3-201ENST00000623228 1824 ntBASIC19.25■□□□□ 0.67
PCDHB13Q9Y5F0 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PCDHB13Q9Y5F0 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB13Q9Y5F0 AP005117.1-201ENST00000584346 1413 ntBASIC19.25■□□□□ 0.67
PCDHB13Q9Y5F0 AC108860.2-201ENST00000562760 2183 ntBASIC19.25■□□□□ 0.67
PCDHB13Q9Y5F0 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB13Q9Y5F0 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB13Q9Y5F0 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PCDHB13Q9Y5F0 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB13Q9Y5F0 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB13Q9Y5F0 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB13Q9Y5F0 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PCDHB13Q9Y5F0 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB13Q9Y5F0 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB13Q9Y5F0 AC009336.1-201ENST00000608941 1553 ntBASIC19.24■□□□□ 0.67
PCDHB13Q9Y5F0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHB13Q9Y5F0 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDHB13Q9Y5F0 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB13Q9Y5F0 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDHB13Q9Y5F0 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB13Q9Y5F0 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.24■□□□□ 0.67
PCDHB13Q9Y5F0 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB13Q9Y5F0 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHB13Q9Y5F0 KLF4P1-201ENST00000412782 1185 ntBASIC19.24■□□□□ 0.67
PCDHB13Q9Y5F0 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDHB13Q9Y5F0 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDHB13Q9Y5F0 RN7SL440P-201ENST00000577855 343 ntBASIC19.24■□□□□ 0.67
PCDHB13Q9Y5F0 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB13Q9Y5F0 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.24■□□□□ 0.67
PCDHB13Q9Y5F0 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms