Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PKP3Q9Y446 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.5■□□□□ 0.39
PKP3Q9Y446 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PKP3Q9Y446 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PKP3Q9Y446 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PKP3Q9Y446 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PKP3Q9Y446 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PKP3Q9Y446 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PKP3Q9Y446 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
PKP3Q9Y446 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PKP3Q9Y446 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PKP3Q9Y446 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PKP3Q9Y446 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PKP3Q9Y446 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PKP3Q9Y446 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PKP3Q9Y446 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
PKP3Q9Y446 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PKP3Q9Y446 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PKP3Q9Y446 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.49■□□□□ 0.39
PKP3Q9Y446 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.49■□□□□ 0.39
PKP3Q9Y446 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.49■□□□□ 0.39
PKP3Q9Y446 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.49■□□□□ 0.39
PKP3Q9Y446 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.49■□□□□ 0.39
PKP3Q9Y446 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PKP3Q9Y446 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.49■□□□□ 0.39
PKP3Q9Y446 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PKP3Q9Y446 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
PKP3Q9Y446 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PKP3Q9Y446 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PKP3Q9Y446 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.49■□□□□ 0.39
PKP3Q9Y446 AC132008.2-207ENST00000454517 770 ntBASIC17.49■□□□□ 0.39
PKP3Q9Y446 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.49■□□□□ 0.39
PKP3Q9Y446 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.49■□□□□ 0.39
PKP3Q9Y446 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.49■□□□□ 0.39
PKP3Q9Y446 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.49■□□□□ 0.39
PKP3Q9Y446 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.49■□□□□ 0.39
PKP3Q9Y446 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PKP3Q9Y446 AC012313.10-201ENST00000623509 926 ntBASIC17.49■□□□□ 0.39
PKP3Q9Y446 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.49■□□□□ 0.39
PKP3Q9Y446 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PKP3Q9Y446 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PKP3Q9Y446 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.49■□□□□ 0.39
PKP3Q9Y446 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PKP3Q9Y446 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PKP3Q9Y446 AC046185.3-201ENST00000623228 1824 ntBASIC17.49■□□□□ 0.39
PKP3Q9Y446 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.49■□□□□ 0.39
PKP3Q9Y446 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PKP3Q9Y446 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.49■□□□□ 0.39
PKP3Q9Y446 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PKP3Q9Y446 PMPCAP1-201ENST00000508114 1576 ntBASIC17.49■□□□□ 0.39
PKP3Q9Y446 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PKP3Q9Y446 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PKP3Q9Y446 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PKP3Q9Y446 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.48■□□□□ 0.39
PKP3Q9Y446 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PKP3Q9Y446 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PKP3Q9Y446 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PKP3Q9Y446 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PKP3Q9Y446 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PKP3Q9Y446 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.48■□□□□ 0.39
PKP3Q9Y446 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PKP3Q9Y446 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.48■□□□□ 0.39
PKP3Q9Y446 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PKP3Q9Y446 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.48■□□□□ 0.39
PKP3Q9Y446 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PKP3Q9Y446 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PKP3Q9Y446 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.48■□□□□ 0.39
PKP3Q9Y446 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PKP3Q9Y446 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.48■□□□□ 0.39
PKP3Q9Y446 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PKP3Q9Y446 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.48■□□□□ 0.39
PKP3Q9Y446 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PKP3Q9Y446 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.48■□□□□ 0.39
PKP3Q9Y446 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PKP3Q9Y446 AP000867.4-201ENST00000641616 219 ntBASIC17.48■□□□□ 0.39
PKP3Q9Y446 AC132938.5-201ENST00000624980 1813 ntBASIC17.48■□□□□ 0.39
PKP3Q9Y446 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.48■□□□□ 0.39
PKP3Q9Y446 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.48■□□□□ 0.39
PKP3Q9Y446 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.48■□□□□ 0.39
PKP3Q9Y446 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PKP3Q9Y446 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
PKP3Q9Y446 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PKP3Q9Y446 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PKP3Q9Y446 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PKP3Q9Y446 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PKP3Q9Y446 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PKP3Q9Y446 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.47■□□□□ 0.39
PKP3Q9Y446 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
PKP3Q9Y446 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PKP3Q9Y446 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PKP3Q9Y446 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PKP3Q9Y446 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PKP3Q9Y446 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PKP3Q9Y446 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PKP3Q9Y446 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PKP3Q9Y446 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.47■□□□□ 0.39
PKP3Q9Y446 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.47■□□□□ 0.39
PKP3Q9Y446 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.47■□□□□ 0.39
PKP3Q9Y446 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PKP3Q9Y446 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms