Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IFT52Q9Y366 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
IFT52Q9Y366 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
IFT52Q9Y366 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.36■□□□□ 0.21
IFT52Q9Y366 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.36■□□□□ 0.21
IFT52Q9Y366 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFT52Q9Y366 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.36■□□□□ 0.21
IFT52Q9Y366 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
IFT52Q9Y366 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
IFT52Q9Y366 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.36■□□□□ 0.21
IFT52Q9Y366 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
IFT52Q9Y366 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFT52Q9Y366 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
IFT52Q9Y366 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFT52Q9Y366 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
IFT52Q9Y366 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.36■□□□□ 0.21
IFT52Q9Y366 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
IFT52Q9Y366 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
IFT52Q9Y366 AC096633.1-201ENST00000422446 749 ntBASIC16.36■□□□□ 0.21
IFT52Q9Y366 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.36■□□□□ 0.21
IFT52Q9Y366 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.36■□□□□ 0.21
IFT52Q9Y366 LINC01238-205ENST00000567549 1107 ntBASIC16.36■□□□□ 0.21
IFT52Q9Y366 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
IFT52Q9Y366 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.36■□□□□ 0.21
IFT52Q9Y366 AL390719.2-201ENST00000606993 987 ntBASIC16.36■□□□□ 0.21
IFT52Q9Y366 HYMAI.1-201ENST00000620949 238 ntBASIC16.36■□□□□ 0.21
IFT52Q9Y366 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
IFT52Q9Y366 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFT52Q9Y366 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFT52Q9Y366 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
IFT52Q9Y366 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFT52Q9Y366 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFT52Q9Y366 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFT52Q9Y366 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFT52Q9Y366 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.36■□□□□ 0.21
IFT52Q9Y366 CROCCP2-202ENST00000412962 2773 ntBASIC16.36■□□□□ 0.21
IFT52Q9Y366 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
IFT52Q9Y366 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.36■□□□□ 0.21
IFT52Q9Y366 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
IFT52Q9Y366 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IFT52Q9Y366 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IFT52Q9Y366 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IFT52Q9Y366 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.35■□□□□ 0.21
IFT52Q9Y366 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
IFT52Q9Y366 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IFT52Q9Y366 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IFT52Q9Y366 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.35■□□□□ 0.21
IFT52Q9Y366 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IFT52Q9Y366 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
IFT52Q9Y366 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
IFT52Q9Y366 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.35■□□□□ 0.21
IFT52Q9Y366 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
IFT52Q9Y366 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IFT52Q9Y366 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IFT52Q9Y366 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
IFT52Q9Y366 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.35■□□□□ 0.21
IFT52Q9Y366 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IFT52Q9Y366 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IFT52Q9Y366 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
IFT52Q9Y366 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.35■□□□□ 0.21
IFT52Q9Y366 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.35■□□□□ 0.21
IFT52Q9Y366 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
IFT52Q9Y366 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.35■□□□□ 0.21
IFT52Q9Y366 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
IFT52Q9Y366 AC097374.2-201ENST00000618617 1306 ntBASIC16.35■□□□□ 0.21
IFT52Q9Y366 OR6D1P-203ENST00000641209 4860 ntBASIC16.35■□□□□ 0.21
IFT52Q9Y366 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
IFT52Q9Y366 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IFT52Q9Y366 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IFT52Q9Y366 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IFT52Q9Y366 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
IFT52Q9Y366 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IFT52Q9Y366 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.35■□□□□ 0.21
IFT52Q9Y366 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IFT52Q9Y366 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IFT52Q9Y366 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.34■□□□□ 0.21
IFT52Q9Y366 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
IFT52Q9Y366 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IFT52Q9Y366 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
IFT52Q9Y366 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
IFT52Q9Y366 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IFT52Q9Y366 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IFT52Q9Y366 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
IFT52Q9Y366 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
IFT52Q9Y366 VENTXP5-201ENST00000523979 775 ntBASIC16.34■□□□□ 0.21
IFT52Q9Y366 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.34■□□□□ 0.21
IFT52Q9Y366 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.34■□□□□ 0.21
IFT52Q9Y366 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.34■□□□□ 0.21
IFT52Q9Y366 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.34■□□□□ 0.21
IFT52Q9Y366 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
IFT52Q9Y366 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
IFT52Q9Y366 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IFT52Q9Y366 AC016396.2-201ENST00000562575 1417 ntBASIC16.34■□□□□ 0.21
IFT52Q9Y366 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IFT52Q9Y366 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.34■□□□□ 0.21
IFT52Q9Y366 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IFT52Q9Y366 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IFT52Q9Y366 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.34■□□□□ 0.21
IFT52Q9Y366 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.34■□□□□ 0.21
IFT52Q9Y366 Z83836.1-201ENST00000624605 1642 ntBASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms