Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.02■□□□□ -0
MRPS28Q9Y2Q9 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
MRPS28Q9Y2Q9 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
MRPS28Q9Y2Q9 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.02■□□□□ -0
MRPS28Q9Y2Q9 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MRPS28Q9Y2Q9 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
MRPS28Q9Y2Q9 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MRPS28Q9Y2Q9 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
MRPS28Q9Y2Q9 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MRPS28Q9Y2Q9 AL596275.1-201ENST00000423464 877 ntBASIC15.02■□□□□ -0
MRPS28Q9Y2Q9 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.02■□□□□ -0
MRPS28Q9Y2Q9 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.02■□□□□ -0
MRPS28Q9Y2Q9 SLC25A3P1-201ENST00000443844 931 ntBASIC15.02■□□□□ -0
MRPS28Q9Y2Q9 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MRPS28Q9Y2Q9 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.02■□□□□ -0
MRPS28Q9Y2Q9 AL441883.1-201ENST00000566170 1045 ntBASIC15.02■□□□□ -0
MRPS28Q9Y2Q9 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.02■□□□□ -0
MRPS28Q9Y2Q9 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.02■□□□□ -0
MRPS28Q9Y2Q9 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.02■□□□□ -0
MRPS28Q9Y2Q9 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
MRPS28Q9Y2Q9 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MRPS28Q9Y2Q9 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
MRPS28Q9Y2Q9 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.02□□□□□ -0.01
MRPS28Q9Y2Q9 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
MRPS28Q9Y2Q9 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
MRPS28Q9Y2Q9 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.02□□□□□ -0.01
MRPS28Q9Y2Q9 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MRPS28Q9Y2Q9 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
MRPS28Q9Y2Q9 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
MRPS28Q9Y2Q9 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MRPS28Q9Y2Q9 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MRPS28Q9Y2Q9 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MRPS28Q9Y2Q9 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MRPS28Q9Y2Q9 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.02□□□□□ -0.01
MRPS28Q9Y2Q9 AC005915.1-201ENST00000624912 2018 ntBASIC15.02□□□□□ -0.01
MRPS28Q9Y2Q9 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.02□□□□□ -0.01
MRPS28Q9Y2Q9 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
MRPS28Q9Y2Q9 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
MRPS28Q9Y2Q9 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
MRPS28Q9Y2Q9 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
MRPS28Q9Y2Q9 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MRPS28Q9Y2Q9 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 PCDHA14-201ENST00000506751 2298 ntBASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 LINC02012-201ENST00000608206 1725 ntBASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 AC096633.1-201ENST00000422446 749 ntBASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 AC145285.6-201ENST00000604632 637 ntBASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 UBALD1-205ENST00000590891 2641 ntBASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 AC046185.3-201ENST00000623228 1824 ntBASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.01□□□□□ -0.01
MRPS28Q9Y2Q9 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MRPS28Q9Y2Q9 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
MRPS28Q9Y2Q9 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms