Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGC3Q9UN70 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGC3Q9UN70 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.34■□□□□ 0.53
PCDHGC3Q9UN70 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.34■□□□□ 0.53
PCDHGC3Q9UN70 LINC01711-201ENST00000598340 967 ntBASIC18.34■□□□□ 0.53
PCDHGC3Q9UN70 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.34■□□□□ 0.53
PCDHGC3Q9UN70 AC008608.2-201ENST00000606089 416 ntBASIC18.34■□□□□ 0.53
PCDHGC3Q9UN70 IFNL4P1-201ENST00000607083 540 ntBASIC18.34■□□□□ 0.53
PCDHGC3Q9UN70 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PCDHGC3Q9UN70 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDHGC3Q9UN70 AL022326.1-202ENST00000641533 845 ntBASIC18.34■□□□□ 0.53
PCDHGC3Q9UN70 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGC3Q9UN70 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGC3Q9UN70 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGC3Q9UN70 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGC3Q9UN70 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGC3Q9UN70 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGC3Q9UN70 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGC3Q9UN70 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGC3Q9UN70 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDHGC3Q9UN70 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDHGC3Q9UN70 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDHGC3Q9UN70 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGC3Q9UN70 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PCDHGC3Q9UN70 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGC3Q9UN70 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGC3Q9UN70 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGC3Q9UN70 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGC3Q9UN70 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
PCDHGC3Q9UN70 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGC3Q9UN70 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGC3Q9UN70 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDHGC3Q9UN70 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGC3Q9UN70 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGC3Q9UN70 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGC3Q9UN70 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGC3Q9UN70 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGC3Q9UN70 BX005266.1-201ENST00000473402 457 ntBASIC18.33■□□□□ 0.52
PCDHGC3Q9UN70 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.33■□□□□ 0.52
PCDHGC3Q9UN70 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.33■□□□□ 0.52
PCDHGC3Q9UN70 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.33■□□□□ 0.52
PCDHGC3Q9UN70 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGC3Q9UN70 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDHGC3Q9UN70 AC097637.2-201ENST00000624096 1997 ntBASIC18.33■□□□□ 0.52
PCDHGC3Q9UN70 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.33■□□□□ 0.52
PCDHGC3Q9UN70 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGC3Q9UN70 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
PCDHGC3Q9UN70 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGC3Q9UN70 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
PCDHGC3Q9UN70 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGC3Q9UN70 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGC3Q9UN70 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGC3Q9UN70 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGC3Q9UN70 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PCDHGC3Q9UN70 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGC3Q9UN70 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
PCDHGC3Q9UN70 DUSP5P1-201ENST00000441325 1139 ntBASIC18.32■□□□□ 0.52
PCDHGC3Q9UN70 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDHGC3Q9UN70 AF238378.1-201ENST00000526806 358 ntBASIC18.32■□□□□ 0.52
PCDHGC3Q9UN70 AC124947.2-201ENST00000547118 1133 ntBASIC18.32■□□□□ 0.52
PCDHGC3Q9UN70 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDHGC3Q9UN70 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHGC3Q9UN70 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PCDHGC3Q9UN70 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGC3Q9UN70 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGC3Q9UN70 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGC3Q9UN70 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDHGC3Q9UN70 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
PCDHGC3Q9UN70 FZD10-202ENST00000539839 3282 ntBASIC18.32■□□□□ 0.52
PCDHGC3Q9UN70 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PCDHGC3Q9UN70 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGC3Q9UN70 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
PCDHGC3Q9UN70 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGC3Q9UN70 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
PCDHGC3Q9UN70 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGC3Q9UN70 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHGC3Q9UN70 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGC3Q9UN70 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGC3Q9UN70 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.31■□□□□ 0.52
PCDHGC3Q9UN70 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGC3Q9UN70 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDHGC3Q9UN70 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHGC3Q9UN70 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGC3Q9UN70 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGC3Q9UN70 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGC3Q9UN70 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PCDHGC3Q9UN70 LINC00982-205ENST00000420957 435 ntBASIC18.31■□□□□ 0.52
PCDHGC3Q9UN70 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGC3Q9UN70 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.31■□□□□ 0.52
PCDHGC3Q9UN70 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PCDHGC3Q9UN70 UNC93B7-201ENST00000509439 705 ntBASIC18.31■□□□□ 0.52
PCDHGC3Q9UN70 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDHGC3Q9UN70 SART3-203ENST00000546611 1184 ntBASIC18.31■□□□□ 0.52
PCDHGC3Q9UN70 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHGC3Q9UN70 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PCDHGC3Q9UN70 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGC3Q9UN70 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGC3Q9UN70 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGC3Q9UN70 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PCDHGC3Q9UN70 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms