Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UBQLN1Q9UMX0 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
UBQLN1Q9UMX0 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
UBQLN1Q9UMX0 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
UBQLN1Q9UMX0 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.64■□□□□ 0.57
UBQLN1Q9UMX0 AC027601.4-201ENST00000611259 610 ntBASIC18.64■□□□□ 0.57
UBQLN1Q9UMX0 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
UBQLN1Q9UMX0 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UBQLN1Q9UMX0 AL590787.1-201ENST00000568856 1315 ntBASIC18.64■□□□□ 0.57
UBQLN1Q9UMX0 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UBQLN1Q9UMX0 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBQLN1Q9UMX0 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.64■□□□□ 0.57
UBQLN1Q9UMX0 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBQLN1Q9UMX0 AC018470.1-201ENST00000624790 3129 ntBASIC18.64■□□□□ 0.57
UBQLN1Q9UMX0 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
UBQLN1Q9UMX0 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UBQLN1Q9UMX0 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBQLN1Q9UMX0 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBQLN1Q9UMX0 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
UBQLN1Q9UMX0 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBQLN1Q9UMX0 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBQLN1Q9UMX0 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBQLN1Q9UMX0 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBQLN1Q9UMX0 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.63■□□□□ 0.57
UBQLN1Q9UMX0 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBQLN1Q9UMX0 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.63■□□□□ 0.57
UBQLN1Q9UMX0 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBQLN1Q9UMX0 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBQLN1Q9UMX0 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.63■□□□□ 0.57
UBQLN1Q9UMX0 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.63■□□□□ 0.57
UBQLN1Q9UMX0 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.63■□□□□ 0.57
UBQLN1Q9UMX0 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.63■□□□□ 0.57
UBQLN1Q9UMX0 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.63■□□□□ 0.57
UBQLN1Q9UMX0 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.63■□□□□ 0.57
UBQLN1Q9UMX0 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBQLN1Q9UMX0 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
UBQLN1Q9UMX0 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
UBQLN1Q9UMX0 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.63■□□□□ 0.57
UBQLN1Q9UMX0 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.63■□□□□ 0.57
UBQLN1Q9UMX0 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBQLN1Q9UMX0 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.63■□□□□ 0.57
UBQLN1Q9UMX0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.62■□□□□ 0.57
UBQLN1Q9UMX0 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.62■□□□□ 0.57
UBQLN1Q9UMX0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
UBQLN1Q9UMX0 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBQLN1Q9UMX0 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBQLN1Q9UMX0 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBQLN1Q9UMX0 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBQLN1Q9UMX0 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBQLN1Q9UMX0 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
UBQLN1Q9UMX0 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.62■□□□□ 0.57
UBQLN1Q9UMX0 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBQLN1Q9UMX0 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.62■□□□□ 0.57
UBQLN1Q9UMX0 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.62■□□□□ 0.57
UBQLN1Q9UMX0 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.62■□□□□ 0.57
UBQLN1Q9UMX0 AL591424.1-201ENST00000442569 1213 ntBASIC18.62■□□□□ 0.57
UBQLN1Q9UMX0 AC108073.2-201ENST00000464002 357 ntBASIC18.62■□□□□ 0.57
UBQLN1Q9UMX0 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.62■□□□□ 0.57
UBQLN1Q9UMX0 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBQLN1Q9UMX0 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.62■□□□□ 0.57
UBQLN1Q9UMX0 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
UBQLN1Q9UMX0 AC140113.2-201ENST00000604370 208 ntBASIC18.62■□□□□ 0.57
UBQLN1Q9UMX0 FAM197Y3-203ENST00000618346 717 ntBASIC18.62■□□□□ 0.57
UBQLN1Q9UMX0 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.62■□□□□ 0.57
UBQLN1Q9UMX0 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBQLN1Q9UMX0 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBQLN1Q9UMX0 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBQLN1Q9UMX0 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBQLN1Q9UMX0 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
UBQLN1Q9UMX0 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
UBQLN1Q9UMX0 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBQLN1Q9UMX0 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
UBQLN1Q9UMX0 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBQLN1Q9UMX0 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBQLN1Q9UMX0 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBQLN1Q9UMX0 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBQLN1Q9UMX0 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
UBQLN1Q9UMX0 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UBQLN1Q9UMX0 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBQLN1Q9UMX0 AL138688.1-201ENST00000624851 1594 ntBASIC18.61■□□□□ 0.57
UBQLN1Q9UMX0 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UBQLN1Q9UMX0 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.61■□□□□ 0.57
UBQLN1Q9UMX0 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBQLN1Q9UMX0 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UBQLN1Q9UMX0 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBQLN1Q9UMX0 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
UBQLN1Q9UMX0 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.61■□□□□ 0.57
UBQLN1Q9UMX0 MED15P5-201ENST00000423150 992 ntBASIC18.61■□□□□ 0.57
UBQLN1Q9UMX0 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.61■□□□□ 0.57
UBQLN1Q9UMX0 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBQLN1Q9UMX0 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBQLN1Q9UMX0 POLD2P1-201ENST00000511220 997 ntBASIC18.61■□□□□ 0.57
UBQLN1Q9UMX0 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBQLN1Q9UMX0 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.61■□□□□ 0.57
UBQLN1Q9UMX0 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.61■□□□□ 0.57
UBQLN1Q9UMX0 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.61■□□□□ 0.57
UBQLN1Q9UMX0 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.61■□□□□ 0.57
UBQLN1Q9UMX0 TERC-201ENST00000602385 541 ntBASIC18.61■□□□□ 0.57
UBQLN1Q9UMX0 GGTLC5P-201ENST00000617623 998 ntBASIC18.61■□□□□ 0.57
UBQLN1Q9UMX0 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms