Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCNL1Q9UK58 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
CCNL1Q9UK58 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
CCNL1Q9UK58 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC21.94■■□□□ 1.1
CCNL1Q9UK58 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCNL1Q9UK58 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCNL1Q9UK58 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC21.94■■□□□ 1.1
CCNL1Q9UK58 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCNL1Q9UK58 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC21.94■■□□□ 1.1
CCNL1Q9UK58 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCNL1Q9UK58 NME2P1-201ENST00000426182 414 ntBASIC21.94■■□□□ 1.1
CCNL1Q9UK58 AC004890.2-204ENST00000481968 304 ntBASIC21.94■■□□□ 1.1
CCNL1Q9UK58 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC21.94■■□□□ 1.1
CCNL1Q9UK58 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC21.94■■□□□ 1.1
CCNL1Q9UK58 NOP2-220ENST00000545915 630 ntTSL 2 BASIC21.94■■□□□ 1.1
CCNL1Q9UK58 AL596325.1-201ENST00000563991 1082 ntBASIC21.94■■□□□ 1.1
CCNL1Q9UK58 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC21.94■■□□□ 1.1
CCNL1Q9UK58 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCNL1Q9UK58 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCNL1Q9UK58 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.94■■□□□ 1.1
CCNL1Q9UK58 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CCNL1Q9UK58 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCNL1Q9UK58 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCNL1Q9UK58 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCNL1Q9UK58 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCNL1Q9UK58 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC21.93■■□□□ 1.1
CCNL1Q9UK58 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCNL1Q9UK58 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCNL1Q9UK58 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCNL1Q9UK58 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC21.93■■□□□ 1.1
CCNL1Q9UK58 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCNL1Q9UK58 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCNL1Q9UK58 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCNL1Q9UK58 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCNL1Q9UK58 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCNL1Q9UK58 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CCNL1Q9UK58 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCNL1Q9UK58 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCNL1Q9UK58 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCNL1Q9UK58 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.93■■□□□ 1.1
CCNL1Q9UK58 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCNL1Q9UK58 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCNL1Q9UK58 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
CCNL1Q9UK58 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC21.93■■□□□ 1.1
CCNL1Q9UK58 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCNL1Q9UK58 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CCNL1Q9UK58 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCNL1Q9UK58 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCNL1Q9UK58 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC21.93■■□□□ 1.1
CCNL1Q9UK58 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC21.93■■□□□ 1.1
CCNL1Q9UK58 ALG1L8P-201ENST00000533887 760 ntBASIC21.93■■□□□ 1.1
CCNL1Q9UK58 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC21.93■■□□□ 1.1
CCNL1Q9UK58 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC21.93■■□□□ 1.1
CCNL1Q9UK58 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC21.93■■□□□ 1.1
CCNL1Q9UK58 COQ9-214ENST00000567933 882 ntTSL 3 BASIC21.93■■□□□ 1.1
CCNL1Q9UK58 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCNL1Q9UK58 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CCNL1Q9UK58 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCNL1Q9UK58 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCNL1Q9UK58 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCNL1Q9UK58 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.92■■□□□ 1.1
CCNL1Q9UK58 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCNL1Q9UK58 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CCNL1Q9UK58 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC21.92■■□□□ 1.1
CCNL1Q9UK58 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
CCNL1Q9UK58 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC21.92■■□□□ 1.1
CCNL1Q9UK58 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CCNL1Q9UK58 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.92■■□□□ 1.1
CCNL1Q9UK58 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCNL1Q9UK58 PIN1P1-201ENST00000412108 996 ntBASIC21.92■■□□□ 1.1
CCNL1Q9UK58 MRPS18AP1-201ENST00000414458 589 ntBASIC21.92■■□□□ 1.1
CCNL1Q9UK58 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC21.92■■□□□ 1.1
CCNL1Q9UK58 RN7SL692P-201ENST00000464677 288 ntBASIC21.92■■□□□ 1.1
CCNL1Q9UK58 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CCNL1Q9UK58 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
CCNL1Q9UK58 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC21.92■■□□□ 1.1
CCNL1Q9UK58 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCNL1Q9UK58 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCNL1Q9UK58 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCNL1Q9UK58 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCNL1Q9UK58 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
CCNL1Q9UK58 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCNL1Q9UK58 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
CCNL1Q9UK58 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNL1Q9UK58 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNL1Q9UK58 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNL1Q9UK58 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC21.91■■□□□ 1.1
CCNL1Q9UK58 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNL1Q9UK58 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CCNL1Q9UK58 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC21.91■■□□□ 1.1
CCNL1Q9UK58 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNL1Q9UK58 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CCNL1Q9UK58 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNL1Q9UK58 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNL1Q9UK58 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNL1Q9UK58 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNL1Q9UK58 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNL1Q9UK58 COX5BP8-201ENST00000416911 349 ntBASIC21.91■■□□□ 1.1
CCNL1Q9UK58 AC241585.1-201ENST00000433527 519 ntBASIC21.91■■□□□ 1.1
CCNL1Q9UK58 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms