Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MBD1Q9UIS9 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MBD1Q9UIS9 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.48■□□□□ 0.39
MBD1Q9UIS9 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
MBD1Q9UIS9 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.48■□□□□ 0.39
MBD1Q9UIS9 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MBD1Q9UIS9 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.48■□□□□ 0.39
MBD1Q9UIS9 AC109462.3-201ENST00000573934 613 ntBASIC17.48■□□□□ 0.39
MBD1Q9UIS9 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.48■□□□□ 0.39
MBD1Q9UIS9 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.48■□□□□ 0.39
MBD1Q9UIS9 AL805961.1-202ENST00000641562 540 ntBASIC17.48■□□□□ 0.39
MBD1Q9UIS9 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
MBD1Q9UIS9 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MBD1Q9UIS9 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
MBD1Q9UIS9 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MBD1Q9UIS9 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.48■□□□□ 0.39
MBD1Q9UIS9 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.48■□□□□ 0.39
MBD1Q9UIS9 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MBD1Q9UIS9 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.48■□□□□ 0.39
MBD1Q9UIS9 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MBD1Q9UIS9 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.48■□□□□ 0.39
MBD1Q9UIS9 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MBD1Q9UIS9 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
MBD1Q9UIS9 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MBD1Q9UIS9 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MBD1Q9UIS9 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
MBD1Q9UIS9 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MBD1Q9UIS9 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
MBD1Q9UIS9 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
MBD1Q9UIS9 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.47■□□□□ 0.39
MBD1Q9UIS9 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
MBD1Q9UIS9 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MBD1Q9UIS9 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
MBD1Q9UIS9 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MBD1Q9UIS9 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MBD1Q9UIS9 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.47■□□□□ 0.39
MBD1Q9UIS9 AL645939.2-201ENST00000427340 991 ntBASIC17.47■□□□□ 0.39
MBD1Q9UIS9 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.47■□□□□ 0.39
MBD1Q9UIS9 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.47■□□□□ 0.39
MBD1Q9UIS9 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.47■□□□□ 0.39
MBD1Q9UIS9 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.47■□□□□ 0.39
MBD1Q9UIS9 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.47■□□□□ 0.39
MBD1Q9UIS9 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.47■□□□□ 0.39
MBD1Q9UIS9 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.47■□□□□ 0.39
MBD1Q9UIS9 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.47■□□□□ 0.39
MBD1Q9UIS9 AL031432.2-201ENST00000566714 459 ntBASIC17.47■□□□□ 0.39
MBD1Q9UIS9 AL928711.1-201ENST00000570165 459 ntBASIC17.47■□□□□ 0.39
MBD1Q9UIS9 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.47■□□□□ 0.39
MBD1Q9UIS9 AC010654.1-201ENST00000615722 808 ntBASIC17.47■□□□□ 0.39
MBD1Q9UIS9 AC004877.2-201ENST00000623941 599 ntBASIC17.47■□□□□ 0.39
MBD1Q9UIS9 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.47■□□□□ 0.39
MBD1Q9UIS9 AC010507.1-201ENST00000633895 436 ntBASIC17.47■□□□□ 0.39
MBD1Q9UIS9 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MBD1Q9UIS9 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MBD1Q9UIS9 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
MBD1Q9UIS9 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.47■□□□□ 0.39
MBD1Q9UIS9 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
MBD1Q9UIS9 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
MBD1Q9UIS9 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
MBD1Q9UIS9 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MBD1Q9UIS9 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MBD1Q9UIS9 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.47■□□□□ 0.39
MBD1Q9UIS9 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
MBD1Q9UIS9 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.47■□□□□ 0.39
MBD1Q9UIS9 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MBD1Q9UIS9 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
MBD1Q9UIS9 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.47■□□□□ 0.39
MBD1Q9UIS9 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.47■□□□□ 0.39
MBD1Q9UIS9 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
MBD1Q9UIS9 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
MBD1Q9UIS9 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MBD1Q9UIS9 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.46■□□□□ 0.39
MBD1Q9UIS9 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MBD1Q9UIS9 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.46■□□□□ 0.39
MBD1Q9UIS9 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MBD1Q9UIS9 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
MBD1Q9UIS9 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
MBD1Q9UIS9 FZD10-202ENST00000539839 3282 ntBASIC17.46■□□□□ 0.39
MBD1Q9UIS9 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MBD1Q9UIS9 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MBD1Q9UIS9 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
MBD1Q9UIS9 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
MBD1Q9UIS9 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
MBD1Q9UIS9 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MBD1Q9UIS9 MRPL20P1-201ENST00000400819 433 ntBASIC17.46■□□□□ 0.39
MBD1Q9UIS9 PTCHD3P3-201ENST00000403073 906 ntBASIC17.46■□□□□ 0.39
MBD1Q9UIS9 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.46■□□□□ 0.39
MBD1Q9UIS9 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.46■□□□□ 0.39
MBD1Q9UIS9 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.46■□□□□ 0.39
MBD1Q9UIS9 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.46■□□□□ 0.39
MBD1Q9UIS9 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.46■□□□□ 0.39
MBD1Q9UIS9 AP002472.1-201ENST00000577490 586 ntBASIC17.46■□□□□ 0.39
MBD1Q9UIS9 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.46■□□□□ 0.39
MBD1Q9UIS9 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MBD1Q9UIS9 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
MBD1Q9UIS9 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.46■□□□□ 0.39
MBD1Q9UIS9 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
MBD1Q9UIS9 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
MBD1Q9UIS9 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.46■□□□□ 0.39
MBD1Q9UIS9 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms