Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.9■□□□□ 0.14
CHRNA9Q9UGM1 RCN1P2-201ENST00000398357 915 ntBASIC15.9■□□□□ 0.14
CHRNA9Q9UGM1 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA9Q9UGM1 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CHRNA9Q9UGM1 AC109462.3-201ENST00000573934 613 ntBASIC15.9■□□□□ 0.14
CHRNA9Q9UGM1 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.9■□□□□ 0.14
CHRNA9Q9UGM1 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.9■□□□□ 0.14
CHRNA9Q9UGM1 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA9Q9UGM1 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA9Q9UGM1 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.9■□□□□ 0.14
CHRNA9Q9UGM1 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CHRNA9Q9UGM1 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.9■□□□□ 0.14
CHRNA9Q9UGM1 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.9■□□□□ 0.14
CHRNA9Q9UGM1 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.9■□□□□ 0.14
CHRNA9Q9UGM1 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.9■□□□□ 0.14
CHRNA9Q9UGM1 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA9Q9UGM1 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA9Q9UGM1 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA9Q9UGM1 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CHRNA9Q9UGM1 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA9Q9UGM1 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CHRNA9Q9UGM1 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA9Q9UGM1 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
CHRNA9Q9UGM1 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CHRNA9Q9UGM1 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA9Q9UGM1 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA9Q9UGM1 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA9Q9UGM1 AL049757.1-201ENST00000616842 1596 ntBASIC15.89■□□□□ 0.13
CHRNA9Q9UGM1 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.89■□□□□ 0.13
CHRNA9Q9UGM1 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA9Q9UGM1 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA9Q9UGM1 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CHRNA9Q9UGM1 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA9Q9UGM1 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA9Q9UGM1 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA9Q9UGM1 NUS1P2-201ENST00000417358 873 ntBASIC15.89■□□□□ 0.13
CHRNA9Q9UGM1 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.89■□□□□ 0.13
CHRNA9Q9UGM1 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA9Q9UGM1 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.89■□□□□ 0.13
CHRNA9Q9UGM1 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.89■□□□□ 0.13
CHRNA9Q9UGM1 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA9Q9UGM1 AC138894.3-201ENST00000603787 634 ntBASIC15.89■□□□□ 0.13
CHRNA9Q9UGM1 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.89■□□□□ 0.13
CHRNA9Q9UGM1 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.89■□□□□ 0.13
CHRNA9Q9UGM1 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.89■□□□□ 0.13
CHRNA9Q9UGM1 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.89■□□□□ 0.13
CHRNA9Q9UGM1 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.89■□□□□ 0.13
CHRNA9Q9UGM1 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.89■□□□□ 0.13
CHRNA9Q9UGM1 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA9Q9UGM1 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA9Q9UGM1 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA9Q9UGM1 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA9Q9UGM1 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA9Q9UGM1 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.89■□□□□ 0.13
CHRNA9Q9UGM1 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA9Q9UGM1 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA9Q9UGM1 AC099398.1-201ENST00000567919 2776 ntBASIC15.89■□□□□ 0.13
CHRNA9Q9UGM1 LYSMD4-203ENST00000378904 2122 ntBASIC15.89■□□□□ 0.13
CHRNA9Q9UGM1 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA9Q9UGM1 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA9Q9UGM1 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CHRNA9Q9UGM1 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHRNA9Q9UGM1 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHRNA9Q9UGM1 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CHRNA9Q9UGM1 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
CHRNA9Q9UGM1 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CHRNA9Q9UGM1 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.88■□□□□ 0.13
CHRNA9Q9UGM1 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHRNA9Q9UGM1 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CHRNA9Q9UGM1 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.88■□□□□ 0.13
CHRNA9Q9UGM1 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.88■□□□□ 0.13
CHRNA9Q9UGM1 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.88■□□□□ 0.13
CHRNA9Q9UGM1 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CHRNA9Q9UGM1 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CHRNA9Q9UGM1 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
CHRNA9Q9UGM1 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHRNA9Q9UGM1 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHRNA9Q9UGM1 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHRNA9Q9UGM1 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.88■□□□□ 0.13
CHRNA9Q9UGM1 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CHRNA9Q9UGM1 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.88■□□□□ 0.13
CHRNA9Q9UGM1 NUS1P1-201ENST00000446295 882 ntBASIC15.88■□□□□ 0.13
CHRNA9Q9UGM1 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.88■□□□□ 0.13
CHRNA9Q9UGM1 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.88■□□□□ 0.13
CHRNA9Q9UGM1 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.88■□□□□ 0.13
CHRNA9Q9UGM1 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.88■□□□□ 0.13
CHRNA9Q9UGM1 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.88■□□□□ 0.13
CHRNA9Q9UGM1 AL139327.4-201ENST00000612362 153 ntBASIC15.88■□□□□ 0.13
CHRNA9Q9UGM1 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.88■□□□□ 0.13
CHRNA9Q9UGM1 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.88■□□□□ 0.13
CHRNA9Q9UGM1 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHRNA9Q9UGM1 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHRNA9Q9UGM1 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHRNA9Q9UGM1 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CHRNA9Q9UGM1 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.88■□□□□ 0.13
CHRNA9Q9UGM1 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHRNA9Q9UGM1 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CHRNA9Q9UGM1 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CHRNA9Q9UGM1 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.88■□□□□ 0.13
CHRNA9Q9UGM1 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms