Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 LAGE3P1-201ENST00000425356 484 ntBASIC17.36■□□□□ 0.37
SPASTQ9UBP0 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.36■□□□□ 0.37
SPASTQ9UBP0 IGHV3-22-201ENST00000520721 359 ntBASIC17.36■□□□□ 0.37
SPASTQ9UBP0 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.36■□□□□ 0.37
SPASTQ9UBP0 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.36■□□□□ 0.37
SPASTQ9UBP0 AC105339.3-201ENST00000560043 636 ntBASIC17.36■□□□□ 0.37
SPASTQ9UBP0 AC145285.3-201ENST00000564603 959 ntBASIC17.36■□□□□ 0.37
SPASTQ9UBP0 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SPASTQ9UBP0 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPASTQ9UBP0 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPASTQ9UBP0 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.36■□□□□ 0.37
SPASTQ9UBP0 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPASTQ9UBP0 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
SPASTQ9UBP0 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.36■□□□□ 0.37
SPASTQ9UBP0 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPASTQ9UBP0 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.36■□□□□ 0.37
SPASTQ9UBP0 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SPASTQ9UBP0 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.36■□□□□ 0.37
SPASTQ9UBP0 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SPASTQ9UBP0 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SPASTQ9UBP0 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.35■□□□□ 0.37
SPASTQ9UBP0 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPASTQ9UBP0 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPASTQ9UBP0 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPASTQ9UBP0 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPASTQ9UBP0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.35■□□□□ 0.37
SPASTQ9UBP0 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.35■□□□□ 0.37
SPASTQ9UBP0 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.35■□□□□ 0.37
SPASTQ9UBP0 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SPASTQ9UBP0 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SPASTQ9UBP0 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.35■□□□□ 0.37
SPASTQ9UBP0 AC098831.1-202ENST00000438821 336 ntBASIC17.35■□□□□ 0.37
SPASTQ9UBP0 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.35■□□□□ 0.37
SPASTQ9UBP0 BX005266.1-201ENST00000473402 457 ntBASIC17.35■□□□□ 0.37
SPASTQ9UBP0 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.35■□□□□ 0.37
SPASTQ9UBP0 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
SPASTQ9UBP0 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.35■□□□□ 0.37
SPASTQ9UBP0 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPASTQ9UBP0 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.35■□□□□ 0.37
SPASTQ9UBP0 AD001527.2-201ENST00000622994 785 ntBASIC17.35■□□□□ 0.37
SPASTQ9UBP0 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SPASTQ9UBP0 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.35■□□□□ 0.37
SPASTQ9UBP0 AC104109.2-201ENST00000602919 1418 ntBASIC17.35■□□□□ 0.37
SPASTQ9UBP0 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SPASTQ9UBP0 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPASTQ9UBP0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SPASTQ9UBP0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SPASTQ9UBP0 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.35■□□□□ 0.37
SPASTQ9UBP0 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SPASTQ9UBP0 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SPASTQ9UBP0 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.35■□□□□ 0.37
SPASTQ9UBP0 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SPASTQ9UBP0 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPASTQ9UBP0 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SPASTQ9UBP0 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPASTQ9UBP0 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPASTQ9UBP0 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SPASTQ9UBP0 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPASTQ9UBP0 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SPASTQ9UBP0 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPASTQ9UBP0 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPASTQ9UBP0 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SPASTQ9UBP0 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SPASTQ9UBP0 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPASTQ9UBP0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.34■□□□□ 0.37
SPASTQ9UBP0 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
SPASTQ9UBP0 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.34■□□□□ 0.37
SPASTQ9UBP0 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SPASTQ9UBP0 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.34■□□□□ 0.37
SPASTQ9UBP0 AC012640.2-201ENST00000561606 901 ntBASIC17.34■□□□□ 0.37
SPASTQ9UBP0 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.34■□□□□ 0.37
SPASTQ9UBP0 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.34■□□□□ 0.37
SPASTQ9UBP0 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.34■□□□□ 0.37
SPASTQ9UBP0 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPASTQ9UBP0 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SPASTQ9UBP0 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.34■□□□□ 0.37
SPASTQ9UBP0 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.34■□□□□ 0.37
SPASTQ9UBP0 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.34■□□□□ 0.37
SPASTQ9UBP0 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.34■□□□□ 0.37
SPASTQ9UBP0 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SPASTQ9UBP0 AC008764.6-201ENST00000595909 2069 ntBASIC17.33■□□□□ 0.37
SPASTQ9UBP0 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SPASTQ9UBP0 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SPASTQ9UBP0 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SPASTQ9UBP0 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
SPASTQ9UBP0 FLJ13224-201ENST00000313737 1514 ntBASIC17.33■□□□□ 0.37
SPASTQ9UBP0 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SPASTQ9UBP0 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SPASTQ9UBP0 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SPASTQ9UBP0 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SPASTQ9UBP0 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SPASTQ9UBP0 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SPASTQ9UBP0 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SPASTQ9UBP0 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SPASTQ9UBP0 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SPASTQ9UBP0 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.33■□□□□ 0.36
SPASTQ9UBP0 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.33■□□□□ 0.36
SPASTQ9UBP0 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.33■□□□□ 0.36
SPASTQ9UBP0 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SPASTQ9UBP0 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms